Gene BamMC406_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2555 
Symbol 
ID6178894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2836385 
End bp2837422 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID641682330 
Productalpha/beta hydrolase fold 
Protein accessionYP_001809248 
Protein GI172061596 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGG CTTCTCCGCC CACCTCGCCG CTGACCGGGG CCCCGGCCCC CGACGACGAT 
TCATTGCGCT ATCGCGCACC GCGCTGGCTG CCGAACAGCC ATGTGCAAAC CATCGTGCCC
GCGCTGTTCG CACGGCGTCC GGCTGTCGCC TACCGACGAG AGCGATGGGA AACCCCCGAC
CACGACTTCA TCGATCTCGA CTGGGTCGCG CACCTCGACA GTGCCGCGCC GCCGCCCGAC
GCACCGCTGT TCGTGCTGTT CCACGGCCTC GAAGGCAGTT CCGGCTCGCA CTACGCGCTG
GCGATGATGG CCGCCGCGCG CGCGAAGGGC TGGCACGCGG TCGTCCCGCA CTTTCGCAGC
TGCAGCGGCG AGTTGAACCG CCAGCCGCGC TTCTACCATC TCGCCGACAG CGCCGAAGTC
GACTGGATCC TGCAGCGGCT CGCCGCGCAG CATCGCGGGC CGATCGTCGC GGCCGGCGTG
TCGCTCGGCG GCAACGTGCT GCTGCGCTGG CTCGGCGAGC ACCGCAGCGA CACGTCGATC
GTGCACGCGG CCGCCGCGAT CTCGACGCCG ATCGACGTGC ATGCGGGCGG CCGCGCGCTG
TCGCAGGGCT TCGCGATGGT CTATACGCGC AGCTTCCTGA AGACGCTCAA GCGCAAGGCG
CTCGCGAAGC TCGACCAGTA TCCGGGCCTG TTCGATCGCG ACGCGATGCT GCGCGCCGTG
ACGATGCGCG ACTTCGACGA GGTCGTGACC GCGCCGCTGC ACGGCTTCGC CGACGCCGAC
GACTACTGGA CCCAGGCCAC GACGCGCCCG CTGCTGCCGG CCATCGACGT GCCCACGCTG
ATCCTCAACG CCCGCAACGA TCCGTTCCTG CCGGAATCCG CGCTGCCGAG CGCCGCCGAC
GTGTCGCCGG CCGTCGAGCT CGACCAGCCC ATGGACGGCG GCCATGCGGG ATTCATGACC
GGACCGTTCC CCGGCCGCCT CGACTGGCTG TCGGCGCGGG TGTTCGGCTA TTGCTCGAAA
TTCGTCGACC ATGGATGA
 
Protein sequence
MSTASPPTSP LTGAPAPDDD SLRYRAPRWL PNSHVQTIVP ALFARRPAVA YRRERWETPD 
HDFIDLDWVA HLDSAAPPPD APLFVLFHGL EGSSGSHYAL AMMAAARAKG WHAVVPHFRS
CSGELNRQPR FYHLADSAEV DWILQRLAAQ HRGPIVAAGV SLGGNVLLRW LGEHRSDTSI
VHAAAAISTP IDVHAGGRAL SQGFAMVYTR SFLKTLKRKA LAKLDQYPGL FDRDAMLRAV
TMRDFDEVVT APLHGFADAD DYWTQATTRP LLPAIDVPTL ILNARNDPFL PESALPSAAD
VSPAVELDQP MDGGHAGFMT GPFPGRLDWL SARVFGYCSK FVDHG