Gene BamMC406_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2551 
Symbol 
ID6178829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp2833445 
End bp2834368 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID641682326 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001809244 
Protein GI172061592 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.317698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.771861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGG CCGACCGCGA CGGCAAGATC TGGATGGACG GCAAGCTGAT CGACTGGCGC 
GACGCCACGA TCCACGTCCT GACCCACACG CTGCACTACG GCATGGGCGT CTTCGAGGGC 
GTGCGCGCGT ACCGGACGGC CGACGGCAGC ACCGCGATCT TCCGCCTGCA CGAGCACACC 
AAACGTCTGC TGAATTCGGC GAAGATCTTC CAGATGGACG TGCCGTTCGA CCGGGAAACC 
CTCGAAGCCG CGCAGCTCGA CGTCGTGCGC GAGAACAAGC TCGAGTCGGG CTACCTGCGC 
CCGATCATCT GGGTCGGCTC GGAAAAGCTC GGCGTGTCCG CGAAGGGCAA CACGATCCAC 
GTCGCGATCG CCGCGTGGCC GTGGGGCGCG TACCTCGGCG AGGAAGGCCT CGCGAAGGGC 
ATCCGCGTGA AGACGTCGTC GTTCACGCGC CACCACGTGA ACGTGTCGAT GGTGCGCGCG 
AAGGCGTCGG GCTGGTACGT GAACTCGATC CTCGCGAACC AGGAAGCAAC CGCCGACGGC 
TACGACGAAG CGCTGCTGCT CGACGTCGAC GGCTACGTGT CGGAAGGCTC CGGCGAGAAC 
TTCTTCCTGG TGAACAACGG CAAGCTGTAC ACGCCCGACC TGTCGTCGTG CCTCGACGGC 
ATCACGCGCG ACACGATCAT CACGCTCGCG CGGGACGCAG GCATCCAGGT GATCGAGAAG 
CGCATCACGC GCGACGAGGT CTACACGGCC GACGAAGCGT TCTTCACGGG CACGGCCGCC 
GAAGTCACGC CGATCCGCGA ACTCGACAAC CGCACGATCG GCAGCGGCGC GCGCGGCCCC 
GTGACGGAAA AGCTCCAGTC GGCGTTTTTC GATATCGTGT CGGGCAAGAA CGCGAAGTAC 
GCGCACTGGC TGACGAAGGT CTGA
 
Protein sequence
MSMADRDGKI WMDGKLIDWR DATIHVLTHT LHYGMGVFEG VRAYRTADGS TAIFRLHEHT 
KRLLNSAKIF QMDVPFDRET LEAAQLDVVR ENKLESGYLR PIIWVGSEKL GVSAKGNTIH 
VAIAAWPWGA YLGEEGLAKG IRVKTSSFTR HHVNVSMVRA KASGWYVNSI LANQEATADG 
YDEALLLDVD GYVSEGSGEN FFLVNNGKLY TPDLSSCLDG ITRDTIITLA RDAGIQVIEK 
RITRDEVYTA DEAFFTGTAA EVTPIRELDN RTIGSGARGP VTEKLQSAFF DIVSGKNAKY 
AHWLTKV