Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2550 |
Symbol | |
ID | 6178782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2832481 |
End bp | 2833236 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682325 |
Product | AzlC family protein |
Protein accession | YP_001809243 |
Protein GI | 172061591 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.121866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCTC GATTGTCCGC CACCGACCGC TTCGCGCTGA TCCAGGGCGC GCGCGACTAT TCCCCGACAC TGATGGCGAT CCTCTCCTGG GGGCTCGTGA CCGGCGTCGC GATGAGCAAG TCGGTGATGA CGCTCGGGCA GGCGAGCGCG ATGTCGATCC TGGTCTACGC GGGCTCGTCG CAGCTCGCGG TGCTGCCGCT CCTCGTCGCG AAGCTGCCGG TCTGGACGAT CCTGCTCACG GCCGCGATGG TCAACCTGCG CTTCGTGATC TTCAGCGCCG GGCTTGCTCC CCATTTCTCC TACCTGCCGC TGTGGCGGCG CCTCGCGATC GGCTATTTCA ACGGCGACGT GATCTACCTG CTGTTCCAGA AACAGGGCTT CGCATACGGC CACGTGCCGG GCAAGGAAGC CTACTTCTGG GGGATGGCGC TCGCGAGCTG GCTGTCGTGG CAGGTGTCGT CGCTCGCCGG CATCCTGCTC GCGAGCGTCT TTCCCGCGAG CTGGGGGCTG GAGCTGGCCG GCACGCTCGC GTTGATCCCG ATCATGGTGT CGGCGGTCGC GAACCGCTCG ACGCTCGCCG CCGTCGCGGT CGCGGGCGTC GTGTCGCTGA TCGCGTTCGA CCTGCCGTAC CGGCTCGCGC TGCCGATCGC GGTGCTGGCC GCGCTCGCGG CCGGCTGCAC GGCCGATTTC TTCGTCGAAC GCGCCGACTG GCGCCGCATC CGCACCGAAA CCGTGCACGA GAAGGAAATC GAATGA
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Protein sequence | MLARLSATDR FALIQGARDY SPTLMAILSW GLVTGVAMSK SVMTLGQASA MSILVYAGSS QLAVLPLLVA KLPVWTILLT AAMVNLRFVI FSAGLAPHFS YLPLWRRLAI GYFNGDVIYL LFQKQGFAYG HVPGKEAYFW GMALASWLSW QVSSLAGILL ASVFPASWGL ELAGTLALIP IMVSAVANRS TLAAVAVAGV VSLIAFDLPY RLALPIAVLA ALAAGCTADF FVERADWRRI RTETVHEKEI E
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