| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2536 |
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| Symbol | |
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| ID | 6178778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2815812 |
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| End bp | 2817296 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682311 |
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| Product | protease Do |
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| Protein accession | YP_001809229 |
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| Protein GI | 172061577 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.483569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.898326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTC GATTCCTTGC GCGCGGCGCC GTCGCGGTCG CCGTGGCGGC CGCCCTGTCC
GCCGGCTATG TCGCGGGCAC CCGCCACGCC GATCCGCAGA TCATCACGCC TGCGCAGGCC
GCTGCGCTGA TGCCGGCCGA GGCCGCGGCG AAGACGGGCA TTCCCGATTT CTCCGGGCTC
GTCGAAACCT ACGGCCCGGC GGTCGTGAAC ATCAGCGCGA AGCACGTCGT GAAGCAGGTG
TCGCGACGCG TGCAGCAGCC GCAACTGCCG ATGGATCCGA GCGATCCGTT CTACCAGTTC
TTCAAGCACT TCTACGGCCA GGTGCCGGGC ATGGGCGGCG ACGCGCAGCC GGACGACCAG
CCGAGCGCGA GCCTCGGTTC GGGCTTCATC GTCAGCGCCG ACGGGTACAT CCTCACGAAC
GCGCACGTGA TCGACGGCGC GAACGTCGTC ACGGTCAAGC TGACCGACAA GCGCGAGTAC
AAGGCGAAGG TCGTCGGCTC CGACAAGCAG TCCGATGTCG CGGTGCTGAA GATCGACGCG
AGCGGCCTGC CGACCGTGAA GATCGGAGAC CCGGGCCAGA GCAAGGTCGG CCAGTGGGTC
GTCGCGATCG GCTCGCCGTA CGGTTTCGAC AACACGGTCA CGTCCGGCAT CATCAGCGCG
AAATCGCGCG CGCTGCCCGA CGAGAACTAC ACGCCGTTCA TCCAGACCGA CGTGCCGGTG
AACCCCGGCA ACTCGGGCGG CCCGCTGTTC AACCTGCAGG GTGAGGTGAT CGGCATCAAC
TCGATGATCT ACTCGCAGAC GGGCGGCTTC CAGGGCCTGT CGTTCGCGAT CCCGATCAAT
GAGGCGATCA AGGTCAAGGA CGAGCTCGTG AAGACGGGCC ACGTGAGCCG CGGCCGCCTC
GGCGTCGCGG TGCAGGGGCT GAACCAGACG CTCGCGAGCT CGTTCGGACT GCAAAAGCCG
GATGGCGCGC TCGTCAGCTC GGTCGACCCG AACGGCCCGG CCGCGAAGGC CGGCCTGCAG
CCGGGCGACG TGATCCTGGG GGTGAACGGC TCGCCGGTGG CCGACTCCAC GTCGCTGCCC
GCGCAGATCG CGAACCTGAA GCCGGGCTCG AAGGCCGATC TGCAGGTGTG GCGCGACAAG
TCGAAGAAGA CGATCAGCGT GACGCTCGGC GCGATGACCG ACGCGAAGCT GGCGTCGAAC
GACGGCGGCC CGGTCGAGCA GGGGCGCCTC GGCGTCGCGG TGCGGCCGCT CACGCCGCAG
GAGCGCAGCG CCACCAACCT GTCGCACGGG CTGATCGTGC AGCAGGCCGG CGGCCCGGCC
GCGACCGCGG GCATCCAGCC CGGCGACGTG ATCCTCGCGG TCAACGGCCG CCCGGTCACG
AACGCCGAGC AATTGCGCGA CGCGGTCAAG GGAGCGGGCA ACAGTCTTGC TCTCCTGATT
CAGCGCGATA ATGCACAGAT CTTCGTGCCG GTCGACCTGA GCTGA
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| Protein sequence | MNTRFLARGA VAVAVAAALS AGYVAGTRHA DPQIITPAQA AALMPAEAAA KTGIPDFSGL
VETYGPAVVN ISAKHVVKQV SRRVQQPQLP MDPSDPFYQF FKHFYGQVPG MGGDAQPDDQ
PSASLGSGFI VSADGYILTN AHVIDGANVV TVKLTDKREY KAKVVGSDKQ SDVAVLKIDA
SGLPTVKIGD PGQSKVGQWV VAIGSPYGFD NTVTSGIISA KSRALPDENY TPFIQTDVPV
NPGNSGGPLF NLQGEVIGIN SMIYSQTGGF QGLSFAIPIN EAIKVKDELV KTGHVSRGRL
GVAVQGLNQT LASSFGLQKP DGALVSSVDP NGPAAKAGLQ PGDVILGVNG SPVADSTSLP
AQIANLKPGS KADLQVWRDK SKKTISVTLG AMTDAKLASN DGGPVEQGRL GVAVRPLTPQ
ERSATNLSHG LIVQQAGGPA ATAGIQPGDV ILAVNGRPVT NAEQLRDAVK GAGNSLALLI
QRDNAQIFVP VDLS
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