Gene BamMC406_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2517 
Symbol 
ID6178698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2795322 
End bp2796212 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content70% 
IMG OID641682293 
ProductABC transporter related 
Protein accessionYP_001809211 
Protein GI172061559 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.328547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCA CTCCCCACGC ACTCGCACTC GATCGCGTCA CGCTCGAACT GGGCGGCCGC 
ACGATCCTGC GCGACGTCAG CTTCTCGATC GAACCCGGCG AATTCGTCGG CGTGCTCGGG
CCGAACGGCG CGGGCAAGAC GACGCTGATG CGCGCGGTGC TCGGCCTCGT GCCCGTCTCG
GGCGGCACGC TGTCGGTCGG CGGCGTGCCG GTCGTGCGCG GCAACGCGTC GATCGGCTAC
ATGCCGCAGA TCAGGAGCGG CCTCGCGAAT CGCCGGATGC GCGGCTACGA CTTCGTCGCG
ATGGCCGCCG ACGGCCATCG CTGGGGGCTG CCGCACCCGA ACGCGGCGAC GCGGCGCGAC
GTCGAGCGCG TGCTCGAGCT CGTCGGCGGC GCGGCGCTCG CGCGCCGGCC GCTGTCGGAG
CTGTCGGGCG GCGAGCGGCA GCGGCTGCTG CTCGCGCAAT GCCTGCTCGG CAGCCCGAAG
CTGCTGCTGC TCGACGAGCC GCTGATCAGC CTCGACCCGA ACCACCAGCG CGGCGTCGTC
GAGCTTGTGC GCAACGTGCA GCGCGAGCTC GGCATCACCG TGCTGTTTTC CGCGCACGAA
CTGAATCCGC TGCTGAACGC GCTCGACCGC GTGCTGTATC TCGGCAACGG CGTCGCGGCG
CTCGGCACCG TCGACGAGGT GATCACCAAG CCGGTGCTGT CGCGACTTTA CGGCTCGCCG
ATCGACGTGA TGCGCGTGAA CGGCAAGATC TTCGTGATGT CGGGCGACGT CGAAGTCGAG
AAGCACGATC ACGAACACGA GGACGACGAC GGCCACTCGC ACGGCGGTGG CGGCGGCCAC
GGCCATCACC ACCACGGACA CGCTCATCCC GGGCATTCGC ACGATGTTTG A
 
Protein sequence
MSPTPHALAL DRVTLELGGR TILRDVSFSI EPGEFVGVLG PNGAGKTTLM RAVLGLVPVS 
GGTLSVGGVP VVRGNASIGY MPQIRSGLAN RRMRGYDFVA MAADGHRWGL PHPNAATRRD
VERVLELVGG AALARRPLSE LSGGERQRLL LAQCLLGSPK LLLLDEPLIS LDPNHQRGVV
ELVRNVQREL GITVLFSAHE LNPLLNALDR VLYLGNGVAA LGTVDEVITK PVLSRLYGSP
IDVMRVNGKI FVMSGDVEVE KHDHEHEDDD GHSHGGGGGH GHHHHGHAHP GHSHDV