| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2502 |
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| Symbol | |
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| ID | 6178664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2778161 |
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| End bp | 2779768 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641682278 |
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| Product | benzoylformate decarboxylase |
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| Protein accession | YP_001809196 |
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| Protein GI | 172061544 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.745207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA CCCCGTCCCA ATCCGCCGCC CCGATCACCG TCCGCGACGC GGTCATCGAC
CTGTTTCGCC AGTTCGGCAT CGATCGTGTG TTCGGCAACC CCGGCTCGAC CGAGCTGCCG
ATGTTCCGCG ATTTCCCCGC CGATTTCCGC TACGTGCTCG GCCTGCAGGA GGCCGTCGTG
GTCGGGATGG CGGACGGTCA TGCGCAGGCC ACCGGCAATG CGGCGGTGGT CAATCTGCAT
TCGGCGGCCG GCGTCGGCAA CGCGATGGGC AACCTGTTCA CCGCGTTCCG GAACCGCACG
CCGCTGGTCG TCACCGCCGG CCAGCAGGCC CGCGCGATCC TGCCGTTCGA TCCGTTTCTC
GGCGCGACCC AGGCCGCCGA GATGCCGAAG CCGTACGTGA AATGGAGCAT CGAGCCCGCG
CGTGCGCAGG ACGTGCCGGC CGCGATCGCG CGTGCGTACC GGATCGCGAT GCAGGAGCCG
CGCGGGCCGG TGTTCGTGTC GATCCCGGTG GACGACTGGG ACCAGCCGGC CGAGCTGCTG
CCGCGCCGCG ACGTGAGCAG CGTCGTGCGG CCCGATCCCG ACGCGCTCGC GCGGCTCGGC
GACGCGCTCG ATGCCGCGCG GCGCCCTGCG CTCGTGGTCG GCGCGGCCGT CGATCGGGCC
GGTGCGTGGG ACGACGTGGT GCGGCTCGCC GAGCGGCACC GCGCAAGCGT GTACGCCGCG
CCGATGTCGG GGCGCTGCAG CTTTCCCGAG GACCATCCGC TGTTCGCCGG CTTCCTGCCC
GCGATCCGCG AGAAGATCGT CGCGCGGCTC GCCTGGCACG ATCTCGTGTT CGCGTTGGGC
GCGCCCGCGT TCACCTATCA CGTCGAGGGC TTCGGCCCGC ATGTGCCGCC GGGCGCGACG
CTCGTGCAGC TCGTCGACGA TCCGGGCGTC GCCGCGTGGA CGCCGTCGGG CGACGCGGTC
GTCGGCAACC TGCGGCTCGC GGCGCGCGAC CTGCTGGCCC GGCCGGCGCC GCCCGAGCGG
CCGATGCCCG CGCCGCGGCC GCCGCGCCCG CGCGCCGCAG CGCCGGCCGC CGGCGAGCGG
ATGTCGGTGG CGTTCGCGCT GCAGACGCTC GCCGAGCTGC GCGACGCGCA CGACATCGTC
GTCGAGGAAG CGCCAAGCGC GCGGCCGGTG ATGCAAACGC ACCTGCCGTT CACGCGCAGC
GGCACGTTCT ACACGATGGA CAGCGGCGGG CTCGGCTACG GGATGCCGGC CGCGGTCGGC
GTCGCGCTCG CGCAGCCGGG CCGGCGTGTG ATCGCGCTGA TCGGCGACGG GTCGAGCCTC
TATTCGGTCC AGGCGTTGTG GAGCGCCGCG CAGCAGAAGC TGCCGATCAC GTTCGTGATC
CTGAACAATC GCCGCTACGC GGCGCTGCAG GACTTCGCGC CCGTGTTCGG TTTCGGTCCC
GACGATCCGG TGCAGGGCAC CGATCTGCCC GACCTGGATT TCGTCGCGCT CGCGCAAGGG
ATGGGATGCC GCGGCATCCG CGTCACCGAT GCCGCACGCC TGCGCGACAC GCTGACGGAT
GCGCAGCGGG CCGGTACGCC CGTCGTCGTC GACGTCGAGG TTGCCTGA
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| Protein sequence | MSGTPSQSAA PITVRDAVID LFRQFGIDRV FGNPGSTELP MFRDFPADFR YVLGLQEAVV
VGMADGHAQA TGNAAVVNLH SAAGVGNAMG NLFTAFRNRT PLVVTAGQQA RAILPFDPFL
GATQAAEMPK PYVKWSIEPA RAQDVPAAIA RAYRIAMQEP RGPVFVSIPV DDWDQPAELL
PRRDVSSVVR PDPDALARLG DALDAARRPA LVVGAAVDRA GAWDDVVRLA ERHRASVYAA
PMSGRCSFPE DHPLFAGFLP AIREKIVARL AWHDLVFALG APAFTYHVEG FGPHVPPGAT
LVQLVDDPGV AAWTPSGDAV VGNLRLAARD LLARPAPPER PMPAPRPPRP RAAAPAAGER
MSVAFALQTL AELRDAHDIV VEEAPSARPV MQTHLPFTRS GTFYTMDSGG LGYGMPAAVG
VALAQPGRRV IALIGDGSSL YSVQALWSAA QQKLPITFVI LNNRRYAALQ DFAPVFGFGP
DDPVQGTDLP DLDFVALAQG MGCRGIRVTD AARLRDTLTD AQRAGTPVVV DVEVA
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