| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2501 |
|---|
| Symbol | |
|---|
| ID | 6178593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2776680 |
|---|
| End bp | 2778131 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641682277 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001809195 |
|---|
| Protein GI | 172061543 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.904792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCG TATCGATGCT GATCGGCGGC CAACGCCGCC ATTCGTCCAG CGGCGCGACC
TTCGTGCGCC GCAACCCGCT CGACGGCGAA GTCGCGTCGG CCGCGCCGGC GTGCACGGCC
GACGATGCAC GCGCGGCGGC CGACGCGGCC GCGCGCGCGT TTCCCGAATG GGCGGCGCTC
GGCCCCGGCG CGCGCCGCGC GTTGCTGCTG AAGGCGGCCG CAGCGCTCGA AGCGAAGCAC
GAGCAGTTCG TCGCCGCGAT GGCGGCCGAA ACCGGCGCGT CGGCGCTGTG GGCCGGCTTC
AACGTGCAGC TTGCCGCGAG CGGGCTCGTC GAGGCCGCGT CGCTGACCAC GCAGATCGGC
GGCGAGCTGA TCCCGTCCGA CGTGCCCGGT TCGCTCGCGA TGGGCGTGCG GCAGCCGGCC
GGCGTCGTGC TCGGCATCGC GCCGTGGAAC GCACCGGTGA TCCTCGCGAC GCGCGCGCTC
GCGCTGCCGC TCGCGTGCGG CAACACGATC GTGCTCAAGG GCTCCGAACT GTGCCCGGTC
ACGCATGGGC TGGTGGTCGA GGCGCTGCAG GAGGCCGGGC TGCCGCCGGG CGTCGTCAAC
TTCGTGACGA ACGCGCCCGA GGATGCGGGC GCCGTGGTCG ACGCACTGAT CGCGCATCCG
GCCGTGCGCC GCGTGAATTT CACCGGATCG ACACGCGTCG GGCGGATCAT CGCCGAAGCG
TGCGCGCGTC ATCTGAAACC GTCGGTGCTC GAACTCGGCG GCAAGGCGCC GTTCGTCGTG
CTCGACGACG CGGATCTCGA CGCGGCGGTC GCGGCGGCCG CGTTCGGCGC GTTCGCGAAT
TCCGGGCAGA TCTGCATGTC GACCGAGCGG ATCATCGTCG ACGCATCGAT CGCCGACGCG
TTCGTCGCGA AGCTCGCCGC CCGGGCCGCG TCGCTGCCGC TCGGCGACCC GCGCCGCGGG
CCCGTCGTGC TCGGCTCGCT GATCGACATG AAGGCTGTCG AGCGCTGCAA CACGCTGATC
GACGATGCGC TCGCGCACGG CGCGACGCTG TTGTGCGGCG GCCAGTCCGA CAGCACGCTG
TTCCCGGCGA CGCTGCTCGA TCGCGTGACG CCCGCGATGC GCATCTATGC GGAGGAGTCA
TTCGGGCCGG TGAAGGGCAT CGTGCGGGTC GACGGCGAGG CCGCCGCGAT CGCCTGCGCG
AACGACAACG CGTTCGGGCT GTCGTCGGCG GTGTTCAGCC GCGACGTCGC GCGCGCGATG
CGCGTCGCGG CGCGCATCGA GTCGGGCATT TGCCACGTGA ACGGCCCGAC CGTGCACGAC
GAGGCGCAGA TGCCGTTCGG CGGCGTGAAG GACAGCGGCT TCGGGCATTT CGGCGGCAAG
GCCGGGATCG CCGCGTTCAC GGACCTCCGC TGGATCACCG TGCAGACCAC GCCGCGCCAC
TATCCGTTCT GA
|
|---|
| Protein sequence | MQTVSMLIGG QRRHSSSGAT FVRRNPLDGE VASAAPACTA DDARAAADAA ARAFPEWAAL
GPGARRALLL KAAAALEAKH EQFVAAMAAE TGASALWAGF NVQLAASGLV EAASLTTQIG
GELIPSDVPG SLAMGVRQPA GVVLGIAPWN APVILATRAL ALPLACGNTI VLKGSELCPV
THGLVVEALQ EAGLPPGVVN FVTNAPEDAG AVVDALIAHP AVRRVNFTGS TRVGRIIAEA
CARHLKPSVL ELGGKAPFVV LDDADLDAAV AAAAFGAFAN SGQICMSTER IIVDASIADA
FVAKLAARAA SLPLGDPRRG PVVLGSLIDM KAVERCNTLI DDALAHGATL LCGGQSDSTL
FPATLLDRVT PAMRIYAEES FGPVKGIVRV DGEAAAIACA NDNAFGLSSA VFSRDVARAM
RVAARIESGI CHVNGPTVHD EAQMPFGGVK DSGFGHFGGK AGIAAFTDLR WITVQTTPRH
YPF
|
|---|
| |