| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2477 |
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| Symbol | |
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| ID | 6178513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2751942 |
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| End bp | 2753504 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641682253 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001809171 |
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| Protein GI | 172061519 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0651033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCGC CTGCCCGCTC ATCCGCGCCG CCCGACGTCG CGGCACTGCT CGCCGCGTTG
CCCAGCCGCA TCGCCGACGT GCCCGCCCGC TGGGCCGCGC AGGCGCCCGC GCATCCAGCG
CTGATCGAGG ACGCACGCCG CCTGTCGTAC GGCGAGCTGT CGCGAGCCGT CGAGGCTGCC
GCCGAGCGGC TCGCGCGCCT GGGCGTGCGC GGCGGCGATC GCGTGATGAT CGTCGCGGAA
AACAGCATCG CGCAGATCGT GCTGCTGTTC GCCGCCGCGC GCGTCGACGC ATGGGCGCTC
GTGTCGAACG CGCGGCTGTC GGCCAGCGAA CTCGATGCGA TCGCCGCGCA CGCGCGCCCG
AAGCTGATCG CGTTCGCCAC GGAAGCGTCG CCCGACGCGC GCGCACACGC GGCGCGCCAC
GACGCGACGC CCGCCGACGC ACTGCCGGTC GATATCGGCG CGTGGTCGCA CCGCGTCGAC
CCGAGCGCGC CCGGCGAACC GATGGCGGCC GACGGCGCCG CCCAATGCGC GGCGCTGATC
TACACGACCG GCACGACGGG CACGCCGAAG GGCGTGATGC TGTCGCATCG CAACCTGCTG
TTCATCGCCG CGATGTCGAG CACGCTGCGC CGCGTGTCAC CCGACGACGT CGTCTATACG
GTGCTGCCCG TGTCGCACGT GTACGGGCTC GCGTCGGTCT GCCTCGGCAG CCTGTATGCG
GGCGCGACGC TGCGGCTCGC GCCGCGCTTC TCGCCGGAGG CCGTGCGCGT CGCGCTCGCC
GACGAAGGCG TGACGATCTT CCAGGGCGTG CCCGCGATGC ACGCGAAGCT GCTCGAGCAC
CTGCACACGC ACGCGCACGC ATGGCGCGCG CCGCGGCTGC GCTTCGCGTA TTCGGGTGGC
TCGCCGCTCG ACGCCGACCT GAAGGCGCGC GTCGAGCGCG TGTACGGCGT GCCGCTGCAC
AACGGCTACG GGATGACCGA GAGCAGCCCG ACGATCACGC AGACGCCGCT CGACGCACCG
CGTACCGACT GCTCGGTCGG CGTGCCGATC CCGGGCGTGG AGATGCGGAT CGTCGCACCG
GACGGCACCG ACGTGCCGCA TGGCGAAGTG GGCGAAATCC GCGTGCGCGG GCCGAACGTG
ATGCTCGGCT ACTACCGCGA CGCGGATGCG ACGCGCGCGG CCGTGTCGCC CGACGGCTGG
CTCGGCACCG GCGATCTCGC GCGCCAGGAA GCGGACGGCT CGGTGACGAT CGCGGGCCGC
AGCAAGGAAC TGATCATCCG CTCGGGCTTC AACGTGTATC CGGTCGAGGT CGAACAGGTG
CTGAACGCGC ACCCGGACGT CGTGCAGGCG GCCGTCGTGG GCCGCGCGGT CGAGGGCAAC
GAGGAAGTGC TCGCGTTCGT CGAGCTGGTG CCCGGCGCGA GCGCGACCGA GGCCGCGCTG
CAGGCGTGGT GCGCGCAACG GCTCGCGCCT TACAAGCGCC CCGCGCGGAT TCGCGTGCTC
GATGCGCTGC CGGCCGCATC GACGGGCAAG GTGCTGAAGC ACAAGCTGCG CGAACTCGCG
TGA
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| Protein sequence | MSSPARSSAP PDVAALLAAL PSRIADVPAR WAAQAPAHPA LIEDARRLSY GELSRAVEAA
AERLARLGVR GGDRVMIVAE NSIAQIVLLF AAARVDAWAL VSNARLSASE LDAIAAHARP
KLIAFATEAS PDARAHAARH DATPADALPV DIGAWSHRVD PSAPGEPMAA DGAAQCAALI
YTTGTTGTPK GVMLSHRNLL FIAAMSSTLR RVSPDDVVYT VLPVSHVYGL ASVCLGSLYA
GATLRLAPRF SPEAVRVALA DEGVTIFQGV PAMHAKLLEH LHTHAHAWRA PRLRFAYSGG
SPLDADLKAR VERVYGVPLH NGYGMTESSP TITQTPLDAP RTDCSVGVPI PGVEMRIVAP
DGTDVPHGEV GEIRVRGPNV MLGYYRDADA TRAAVSPDGW LGTGDLARQE ADGSVTIAGR
SKELIIRSGF NVYPVEVEQV LNAHPDVVQA AVVGRAVEGN EEVLAFVELV PGASATEAAL
QAWCAQRLAP YKRPARIRVL DALPAASTGK VLKHKLRELA
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