| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2475 |
|---|
| Symbol | |
|---|
| ID | 6178447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2750343 |
|---|
| End bp | 2750981 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641682251 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsY |
|---|
| Protein accession | YP_001809169 |
|---|
| Protein GI | 172061517 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0344] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0301507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCC TGCTCGCCGC ACTTGTTGCT TACCTGATCG GTTCGGTGTC GTTCGCCGTC
GTCGTCAGCG CCGCGATGGG CCTGGCCGAT CCCCGTTCGT ACGGGTCGAA GAATCCTGGC
GCGACCAACG TGCTGCGCAG CGGCAACAAG AAGGCCGCGA TCCTGACGCT CGTCGGCGAC
GCGTTCAAGG GCTGGCTCGC CGTCTGGCTC GCGCGGCACT TCGGGCTGCC CGACGTCGCC
GTGGCGTGGG TCGCGATCGC CGTGTTCCTT GGCCACTTGT ACCCGGTGTT CTTCCGCTTC
CAGGGCGGCA AGGGCGTCGC GACCGCGGCC GGCGTGCTGC TCGCGGTGCA CCCGGTGCTT
GGGCTCGCGA CCGCGCTGAC CTGGCTGATC GTCGCGTTCT TCTTCCGCTA TTCGTCGCTC
GCCGCGCTGG TGGCGGCCGT GTTCGCGCCG CTGTTCGACG TGTTCCTGTT CGGCACGCGC
CACAACCCGG TCGCGTGGGC CGTGCTCGCG ATGAGCGTGC TGCTCGTGTG GCGTCACCGC
GGCAACATCT CGAAGCTGCT GGCGGGGCAG GAAAGCCGGA TCGGCGACAA GAAGAAGGCC
GCGGCCAACG GCGGCGCGCA GGACGGCGGG AAGCTCTGA
|
|---|
| Protein sequence | MQILLAALVA YLIGSVSFAV VVSAAMGLAD PRSYGSKNPG ATNVLRSGNK KAAILTLVGD
AFKGWLAVWL ARHFGLPDVA VAWVAIAVFL GHLYPVFFRF QGGKGVATAA GVLLAVHPVL
GLATALTWLI VAFFFRYSSL AALVAAVFAP LFDVFLFGTR HNPVAWAVLA MSVLLVWRHR
GNISKLLAGQ ESRIGDKKKA AANGGAQDGG KL
|
|---|
| |