| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2467 |
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| Symbol | |
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| ID | 6178430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2742857 |
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| End bp | 2743615 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682243 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001809161 |
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| Protein GI | 172061509 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00815541 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGATTC GCGGCAACGT CTTTCTGATC ACGGGCGGCG CATCGGGCCT CGGCGCCGGA
ACGGCCCGCA TGCTCGCGCA GGCCGGCGGC AAGGTCGTGC TCGCCGACCT GAACGAGGCG
GCCGGCATGG CGCTCGCGCA CGAACTGGGC GGCGTATTCG TGCGCTGCGA CGTGTCGAGC
GAGGCCGATG CGCAGGCGGC CGTCGACGCC GCGACGCGCG CGGGCACACT GCGCGGCCTC
GTGAACTGCG CGGGCATCGC GCCAGCCGCG AAAACCGTCG GCAAGGACGG CGCGCATCCG
CTCGACGTGT TCGCGAAGAC GATCAACGTG AACCTGGTCG GCACCTTCAA CATGATCCGG
CTCGCGGCCG CCGCGATGGC CGCGACCACG CCGAACGACG GCGGCGAGCG CGGCGTGATC
GTCAGCACCG CATCGGTCGC CGCCTACGAC GGCCAGATCG GCCAGGCCGC GTACGCGGCG
TCGAAGGCCG GCGTCGCGGG CATGACGCTG CCGATCGCGC GCGACCTCGC GCGCCAGGGC
ATCCGCGTGA TGACGATCGC GCCGGGGCTG TTCGAGACGC CGATGCTGCT CGGCATGCCG
AAGGACGTGC AGGACGCGCT CGGCGCGATG GTCCCGTTCC CGCCGCGGCT CGGCAAACCG
GACGAATACG CGATGCTGGT GCGCCAGATC GTCGAGAACC CGATGCTCAA CGGCGAAGTG
ATCCGCCTCG ACGGCGCGAT CCGGATGCAG CCGAAGTAA
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| Protein sequence | MEIRGNVFLI TGGASGLGAG TARMLAQAGG KVVLADLNEA AGMALAHELG GVFVRCDVSS
EADAQAAVDA ATRAGTLRGL VNCAGIAPAA KTVGKDGAHP LDVFAKTINV NLVGTFNMIR
LAAAAMAATT PNDGGERGVI VSTASVAAYD GQIGQAAYAA SKAGVAGMTL PIARDLARQG
IRVMTIAPGL FETPMLLGMP KDVQDALGAM VPFPPRLGKP DEYAMLVRQI VENPMLNGEV
IRLDGAIRMQ PK
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