| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2455 |
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| Symbol | |
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| ID | 6178311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2731237 |
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| End bp | 2732511 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641682231 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001809149 |
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| Protein GI | 172061497 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000463502 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATGA TCGACATCGA TCCCCCCGGC TTCCAGCCGC CCCGCCCCGT CGCCGGCGAC
GACGGAAAGC GGCGCACCGT GCTGTACGGC GCGTACACCG TATTCAGCGT GTTCCAGCCG
GTTTTCTCGG TGTCGCACCG CCGCGCGATC GGCTATCACG CGTCGCTGCG CGCGCACGAC
GAGGAAAGCC GCCAGGTCGC GTCGCACGAG GTGTTCACGC AGGCGGCGCG GCGCGGCGAC
CTGCTCGAGC TCGGCCGGCT CGCCGAATCG CTGCATCTCG GCAACTTCCA CGCGTTCGAC
AGCCACGACG AATGGCTTTT CCTGAGCCTG CATCCGGCCG CGCTGATGGA CACCGTCTAC
GGCGACGCGC TGCTCGCGAA CCTGAAGGCG CTCGGCCTGC CGCCGCATCG CGTGGTGCTC
GAGGTGCCGG AACAGGCAGG CGGCGAGACG CCGCGCTACG CGGCAATCGT CGACGGGTTG
CGCAAGGCCG GCTTCCTGAT CGCGCTCGGC GGCTTCGGCG CGAAGCATTC GAACATCGAC
CGCGTGTGGC ACCTGCACCC CGACATCGTC ACGCTCGATC GCGGCATCCT CGCGCAGGCG
AGCGAGCACT CGCATCTCGA ACGCGTGCTG CCCGGGCTCG TGTCGCTGCT GCACGAATCC
GGCCAGCTCG TGCTGATGGG CGGCCTCGCG ACCGAGCGTG ACGCGCTGAT CGCGCTCGAA
TGCGACGTCG ATTTCGTGCA AGGGCAGTAC TTCGCGGGGC CGAGCGTCGA TCCCGTCCAG
CCGCAGGCCG CCGCCGGCTG CATGGACACG CTGTCGGCCG CCTTGCGGCT GCGCGTCGCG
CAACGCGAGC GCACGCAGGC CGAACGCCTC GCGCCGTATG TCGCCGCGCT GGAGGAAGCG
AGCCAGAAGC TCGCCGCGGG CGAGCCGCTG ATCGACGCCG CCGGCGCCGT GCTCGGGTTG
CCGGAAACCG CGCGCTGCTT CCTGCTCGAT GCATCGGGCC GCCAGATCGG CGACAACGTG
CTCGCGCGCG GCAGCGTCTC GCAGCGGGCG AAACGCTTCC GGCCGCTGCT GCATTCGGAA
GGCGCGAGCT GGGAGCGCCG CCCGTACTTC AGCCACGCGA TGCGCGCGCC GGGCCGCGTG
CATCTGACGC CGCCGTACCT GTCGATCAAC GAGGCGCACC TGTGCGTGAC CGCATCGATC
GCCGCGCCGG TCGCGACCGG CATGCAGGTG TTGTGCGTGG ACATCAACTG GGAAGCGGCG
CTCAACCGCG AATGA
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| Protein sequence | MSMIDIDPPG FQPPRPVAGD DGKRRTVLYG AYTVFSVFQP VFSVSHRRAI GYHASLRAHD
EESRQVASHE VFTQAARRGD LLELGRLAES LHLGNFHAFD SHDEWLFLSL HPAALMDTVY
GDALLANLKA LGLPPHRVVL EVPEQAGGET PRYAAIVDGL RKAGFLIALG GFGAKHSNID
RVWHLHPDIV TLDRGILAQA SEHSHLERVL PGLVSLLHES GQLVLMGGLA TERDALIALE
CDVDFVQGQY FAGPSVDPVQ PQAAAGCMDT LSAALRLRVA QRERTQAERL APYVAALEEA
SQKLAAGEPL IDAAGAVLGL PETARCFLLD ASGRQIGDNV LARGSVSQRA KRFRPLLHSE
GASWERRPYF SHAMRAPGRV HLTPPYLSIN EAHLCVTASI AAPVATGMQV LCVDINWEAA
LNRE
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