| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2451 |
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| Symbol | |
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| ID | 6178323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2726266 |
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| End bp | 2727657 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641682227 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001809145 |
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| Protein GI | 172061493 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000018113 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACCCG AACTCGCATT GACCCGTTTG TGGCAACTCG CGCACGGCGC GCCTGACGCG
CTGGCCCGCG CGGCCGTGAC GGGGCAGGAC CCGACGCTGC CGTCGACGTT CCACGTCGGC
ACGCTGGCCG CGGCGACGAT CGCGGCAGCG GGCCTCGCGG CGGCCGAATG TCACCGGTTC
CGCACGGGTG TCGCGCAGCG CGTCGACGTG TCGATGCGCG ATGCGCTCGT CGCGTTCCGC
AGCGAACGCT ACCTGCGCGT CGACGATGGG CCGCCGCCCG AGCCGCGTCA TCCGGTGACG
GGCTTCTACG ACACGCGCGA CGGACGCTGG ATCCAGCTGC ATGCGAACTT TGCGCATCAC
CTGCGCGGGA TTCTCGACGT GCTCGGCTGC GGCCCGCGGC GTGACGACGT TGCCGCGGCG
ATCCGCACGT GGGACGGCGC GGCGCTCGAT ACCGCGCTGG CCGAGGCCGG CCTGTGCGCG
GCATTGATCA GAACCCCTGA CGAATGGGCT GCGCACGACC AGGCGCGCGC GCTCGCGTCG
CTGCCGCTGT TCGAGATCGA GCGGATCGGC GATGCACCCG TCGAGGCGAT CGGACGCGGC
GAGCCCGACC AGCCGCTCGC GGGCGTGCGC GTGCTCGATC TCACGCGCAT CATCGCGGGG
CCGGTCGCGG GCCGCACGCT CGCGTCGCAC GGCGCGCAAA CGCTGCTTGT CAACGGCCCG
CACCTGCCGA ACATCGCGTC GCTCGTGATC GACAACGGGC GCGGCAAGCG CTCGACGTGG
ATCGACCTGC GCGAGGCGGC AGGCGTCGCC GCGCTGCGCG ATCTCGCACG CCACGCCGAC
GTATTCCTGC AGGCCTATCG CCCGGGCGCG CTCGCGGCGC GCGGGTTCTC GCCGCAGGCG
CTCGCGGAAC TGCGGCCGGG CATCGTCTGC GTGTCGGTGT CGGCATACGG ACACACGGGG
CCGTGGTCGA TGCGGCGCGG CTTCGACAGC CTCGTGCAGT CGGCGAGCGG CATTGCATGG
AGCGAGCAGC GCGCCGCGCA CGCGGACGGC CCGCGCCATC TGCCGTGCCA GGCGCTCGAT
CATGCGACGG GGTGTCTGGC CGCGTTCGGC GCGATGATCG CGCTCGCGCG GCGGGCGACG
GAGGGGGGAA GCTGGCACGT GCGGTTGTCG CTCGCGCAGA CGGGGCGCTG GCTGCAATCG
TTCGGCGTGG TACCGGACGG TCTGCACGCA CCGGAGTTCA CGTCCGACGA CGTGCGCGAC
CGGATCGACC GGAGCGCGTC GCCGTTTGGC ACGATCGATG CGGTGCGTCC GGCCGAACGC
CTGTCGGCGA CGCCGCCGCG CTTCGCCCGG CCGCCCGTTC CGCTCGGCAC GGACGACGCG
CGCTGGCTGT GA
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| Protein sequence | MTPELALTRL WQLAHGAPDA LARAAVTGQD PTLPSTFHVG TLAAATIAAA GLAAAECHRF
RTGVAQRVDV SMRDALVAFR SERYLRVDDG PPPEPRHPVT GFYDTRDGRW IQLHANFAHH
LRGILDVLGC GPRRDDVAAA IRTWDGAALD TALAEAGLCA ALIRTPDEWA AHDQARALAS
LPLFEIERIG DAPVEAIGRG EPDQPLAGVR VLDLTRIIAG PVAGRTLASH GAQTLLVNGP
HLPNIASLVI DNGRGKRSTW IDLREAAGVA ALRDLARHAD VFLQAYRPGA LAARGFSPQA
LAELRPGIVC VSVSAYGHTG PWSMRRGFDS LVQSASGIAW SEQRAAHADG PRHLPCQALD
HATGCLAAFG AMIALARRAT EGGSWHVRLS LAQTGRWLQS FGVVPDGLHA PEFTSDDVRD
RIDRSASPFG TIDAVRPAER LSATPPRFAR PPVPLGTDDA RWL
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