| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2443 |
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| Symbol | |
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| ID | 6178208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2716201 |
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| End bp | 2717457 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641682219 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001809137 |
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| Protein GI | 172061485 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000919661 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGTATC AGCACATCAA GGTTCCGGAG GGCGGTGACA AGATCACCGT CAACAAGGAC
TACTCGCTCA ACGTTTCCGA TCAGCCGATC ATTCCCTATA TCGAAGGCGA CGGTACGGGC
TTCGATATCA CGCCGGTCAT GATCAAGGTC GTCGACGCGG CGGTGGCCCA TGCCTACAAG
GGCAAGCGCA AGATCCACTG GATGGAGATC TTCGCGGGCG AGAAGGCGAC GAAGGTGTAC
GGTCCGGACG TGTGGCTGCC GGACGAAACG CTGCAGGTGC TGAAGGAATA CGTGGTGTCG
ATCAAGGGGC CGCTCACGAC CCCGGTCGGC GGCGGCATCC GTTCGCTGAA CGTCGCGCTG
CGCCAGGAAC TCGACCTGTA CGTGTGCCTG CGCCCGGTCC AGTATTTCAA GGGCGTGCCC
TCGCCGGTGC GCGAGCCGCA AAAGATCGAC ATGGTGATCT TCCGCGAGAA CTCGGAAGAC
ATCTACGCGG GCATCGAGTG GGCCGCGGGC TCCGAGCAGG CGAAGAAGGT GATCAAGTTC
CTGCAGGACG AGATGGGCGT GAAGAAGATC CGCTTCCCGG AAACCTCGGG GATCGGCGTC
AAGCCCGTGT CGACCGAAGG CACCGAGCGT CTCGTGCGCA AGGCGATCCA GTATGCGATC
GACAACGATC GCAAGTCGGT CACGCTGGTG CACAAGGGCA ACATCATGAA GTTCACGGAA
GGCCTGTTCC GTGACGCCGG CTACGCGCTC GCGCAGAAGG AATTCGGCGG CGAGCTGATC
GACGGCGGCC CGTGGATGCG CGTGAAGAAC CCGAAGACGG GCAACGAGAT CGTCATCAAG
GATTCGATCG CCGATGCATT CCTGCAGCAG ATCCTGCTGC GTCCGGCCGA ATACGACGTG
ATCGCGACGC TGAACCTGAA CGGCGACTAC ATCTCCGACG CACTGGCCGC GCAGGTCGGC
GGCATCGGGA TCGCGCCGGG CGCGAACCTG TCGGATTCGG TCGCGATGTT CGAGGCGACA
CACGGCACGG CGCCGAAGTA CGCGGGCAAG GATTACGTGA ACCCCGGTTC GGAGATCCTG
TCGGCGGAAA TGATGCTGCG CCACCTCGGC TGGACGGAAG CGGCCGACAC GATCATCGCC
GCGATGGAAA AGTCGATCCT GCAGAAGCGC GTCACGTACG ACTTCGCGCG CCTGATGGAA
GGCGCGACGC AGGTGTCGTG CTCCGGCTTC GGCGAAGTGC TGATCGAGAA CATGTAA
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| Protein sequence | MPYQHIKVPE GGDKITVNKD YSLNVSDQPI IPYIEGDGTG FDITPVMIKV VDAAVAHAYK
GKRKIHWMEI FAGEKATKVY GPDVWLPDET LQVLKEYVVS IKGPLTTPVG GGIRSLNVAL
RQELDLYVCL RPVQYFKGVP SPVREPQKID MVIFRENSED IYAGIEWAAG SEQAKKVIKF
LQDEMGVKKI RFPETSGIGV KPVSTEGTER LVRKAIQYAI DNDRKSVTLV HKGNIMKFTE
GLFRDAGYAL AQKEFGGELI DGGPWMRVKN PKTGNEIVIK DSIADAFLQQ ILLRPAEYDV
IATLNLNGDY ISDALAAQVG GIGIAPGANL SDSVAMFEAT HGTAPKYAGK DYVNPGSEIL
SAEMMLRHLG WTEAADTIIA AMEKSILQKR VTYDFARLME GATQVSCSGF GEVLIENM
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