Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2439 |
Symbol | |
ID | 6178254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2708442 |
End bp | 2710655 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682215 |
Product | YadA domain-containing protein |
Protein accession | YP_001809133 |
Protein GI | 172061481 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000109302 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000563921 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAATAA TTAGTGGTCC GAATAATATG CGGAAAATGA AGGGCGGGCA CTCCGCTTCG GATACCGCAC GCGTGCTCGC CAAGCGTGCG ATCGCGGTCG GTGTGACGGG CATGCTGGGA TTGATGCTCG TAGACGCGAA CGCGCAAACG ATCGGCGAAC GGGTGGACTC GCTGGAAAGT AGCGTGTCGA CGATCAACGG TAGGCTGTCG GGCCTGCAGA GCGATGTCTC GAACCTGAAG AATCGTCTCG AAGGTTCGCT GCCGTCCCCC GGCACTGGCA AGGACAGTGT CGCGGTTGGC AAGAGTTCGA ATGCATCCGG GGCGGGGAGT ACGGCAGTCG GTGTGAACGC ATCGGCAACC GGCGACTCGA GCACGGCGAC GGGTGCAGAT TCGGAGGCGT CGGGCACGGA CAGCACGGCC AACGGCGCAC GCTCGAAGGC GACCGGCGAT TCGAGCACGG CGACGGGTGC AGATTCGGAG GCGTCGGGCA AGGACAGCAC GGCCAACGGC GCGCGCTCGA AGGCGACCGG CGATTCGAGC ACGGCAACGG GTGCAGATTC GGAGGCGTCC GGCAAGGACA GCACAGCCAA CGGCGCGCGC TCGAAGGCAA CCGGCGACTC GAGCACGGCG GCAGGTGCAG ATTCGCAGGC GTCGGGCAAG GACAGCACGG CCAACGGCGC ACGCTCGAAG GCAACCGGCG ACTCGAGCAC GGCAGCAGGT GCAGATTCGG AGGCGTCGGG CAAGGACAGC ACGGCCAACG GCGCACGCTC GAAGGCAACC GGCGACTCGA GCACGGCAGC AGGTGCAGAT TCGGAGGCGT CGGGCAAGGA CAGCACGGCC AACGGCGCAC GCTCGAAGGC AACCGGCGAC TCGAGCACGG CGGCAGGTGC AGATTCGGAG GCATCGGGCA AGGACAGCAC GGCCAACGGC GCACGCTCGA AGGCAACCGG CGAATCGAGC ACGGTGGCAG GTGCAGATTC GGAGGCGTCC GGCAAGGACA GCACGGCCAA CGGCGCACGC TCGAAGGCAA CCGGCGACTC GAGCACGGCA GCAGGTGCAG ATTCGCAGGC GTCGGGCAAG GACAGCGCAG CCAACGGCGC ACGCTCGAAG GCAACCGGCG ACTCGAGCAC GGCAGCAGGT GCAGATTCGC AGGCGTCGGG CAAGGACAGC ACGGCCAACG GCGCGCGCTC GAAGGCAACC GGCGACTCGA GCACGGCGGC AGGTGCAGAT TCGCAGGCGT CGGGCAAGGA CAGCACGGCC AACGGCGCGC GCTCGAAGGC AACCGGCGAA TCGAGCACGG CAGCAGGTGC AGACGCGCAG GCGTCGGGCA GGGACAGCAC GGCCAACGGC GCGCGCTCGA CGGCAACCGG CGAATCGAGC ACGGCAGCAG GTGCAGACTC GCAGGCGTCG GGCAGGGACA GCACGGCCAA CGGCGCACGC TCGAAGGCAA CCGGCGAATC GAGCACGGCA GGAGGTGCAG ATTCGGTGGC GTCGGGCAAG GACAGCACGG CCAACGGCGC GCGCTCGAAG GCAACTGGCG ACTCGAGCAC GGTGGCAGGT GCAGATTCGG AGGCGTCCGG CAAGGACAGC ACGGCCAACG GCGCGCGCTC GAAGGCAACC GGCGACTCGA GCACGGCAGC AGGTGCAGAT TCGGAGGCGT CCGGAAAGGA CAGCACGGCA ACCGGCGCGC GCGCGCGGGC GAGCGGCAGC GATTCGACGG CAATGGGCAC GAACGCAAAG GCCCTCGGCG ACGGCAGCTC GAGCTTCGGC GCCGGGGCGT CCTCGTCAGG CACGAACAGC ACGGCGCTCG GCACGAACGC GGTCGCGACC GGCCGGAATT CGGTTGCGCT CGGCCACGGC TCGATTGCCG ATCGTGACGA CACCGTGTCG ATCGGGGCGC CGGGGCAAGA GCGCAAGCTC GCGAACGTCG CCGACGCAGT TCTGCCTCAC GACGCGGTCA ACCTGAAGCA GTTGAACGCA GTAGCCCGGC GCGCGTACAG CGGTGTGGCC GCGGCGACCG CATTGTCGAT GATTCCGGAT GTCGATCTGG GCAAGACGAT CGCAGTGGGC GTCGGCATGG GCAGCTATCT CGGCTACCAG GCCGTCGCGC TCGGCGCGTC GGTGCGGATC GGCGAAAACC TGAAGGTGCG CGCTGGAGCC GGGATCAGTT CGGCTTCGAC GACGTGGGGT GCGGGCGCGT CGTACAGCTG GTAA
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Protein sequence | MKIISGPNNM RKMKGGHSAS DTARVLAKRA IAVGVTGMLG LMLVDANAQT IGERVDSLES SVSTINGRLS GLQSDVSNLK NRLEGSLPSP GTGKDSVAVG KSSNASGAGS TAVGVNASAT GDSSTATGAD SEASGTDSTA NGARSKATGD SSTATGADSE ASGKDSTANG ARSKATGDSS TATGADSEAS GKDSTANGAR SKATGDSSTA AGADSQASGK DSTANGARSK ATGDSSTAAG ADSEASGKDS TANGARSKAT GDSSTAAGAD SEASGKDSTA NGARSKATGD SSTAAGADSE ASGKDSTANG ARSKATGESS TVAGADSEAS GKDSTANGAR SKATGDSSTA AGADSQASGK DSAANGARSK ATGDSSTAAG ADSQASGKDS TANGARSKAT GDSSTAAGAD SQASGKDSTA NGARSKATGE SSTAAGADAQ ASGRDSTANG ARSTATGESS TAAGADSQAS GRDSTANGAR SKATGESSTA GGADSVASGK DSTANGARSK ATGDSSTVAG ADSEASGKDS TANGARSKAT GDSSTAAGAD SEASGKDSTA TGARARASGS DSTAMGTNAK ALGDGSSSFG AGASSSGTNS TALGTNAVAT GRNSVALGHG SIADRDDTVS IGAPGQERKL ANVADAVLPH DAVNLKQLNA VARRAYSGVA AATALSMIPD VDLGKTIAVG VGMGSYLGYQ AVALGASVRI GENLKVRAGA GISSASTTWG AGASYSW
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