Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2435 |
Symbol | |
ID | 6177422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2703348 |
End bp | 2704727 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641682211 |
Product | amino acid permease-associated region |
Protein accession | YP_001809129 |
Protein GI | 172061477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0155643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000341886 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | GTGACACAAC AACAACGGTC GTTCGACAAC ATCGTCGCGC GCGAACAAGG GTTGCGCCAC GCGCTGACGT CGGGGCAGAT GGCAATGATC GCGATCGGCG GCGCGATCGG CACGGGGCTG TTCCTCGGCA GCGGGTTCGC GATCGGGCTC GCCGGCCCGA GCGTGCTGCT CTCGTATGCG ATCGGCGCGC TGATTGCGCT GCTGCTGATG GGCGCGCTCG CGGAAATGAC GGTCGCGCAT CCGACGGCCG GTTCGTTCGG CGCATACGCC GAGCACTACG TCGGCCCGCT CGCGGGCTTT CTCGTGCGCT ATGCGTACTG GTTCGCGGTG GTGTTCGCGA TCGGTACCGA GATCAGCGCG ATCGCCGTCT TCATGAAGTA CTGGTTCCCG GCCGTGCCCG GCTGGTACTG GGTGATCGGC TTCTCCGCGC TGCTGATCGC GGTGAACCTC GCGAGCGTCA CGCTGTACGG GTCGGTCGAA TACGCGTTTT CGTTGCTGAA GATCGCGGCG ATCGTCGTGT TCATCGTGCT CGGCGCGTAT CTCGTGTGGT CGGCGCCGGC GGCTGCCGGC ATCGGCTTCG CGAACTACAC CGCGCACGAC GGCTTCATGC CGAAAGGGCC GTGGGGCACC TGGGTCGCGG TGATCGTCGC GATCTTCAGC TACATGAGCA TCGAGGCGGT CGCGATCGCG GCCGGCGAGG CGCGTGATCC GCAGCATGCG GTCACGCGTG CATTCCGCTC GACGGTGTTC CGGCTCGTGC TGTTCTACCT GCTGACGCTG TCGCTGATGC TCGCGATCGT GCCCTGGACG CAGGCCGGCA CCGACGAAAG CCCGTTCGTG AAGGTGATGG CTGCCACCCA CGTGCCGTAT GCGGCCGGCG TGATCAACTT CGTGCTGCTG ATCGCCGCGC TGTCGGCGAT GAACAGCCAG CTCTACGTGA CGACGCGGAT GATGTTCAGC CTGTCGCGTG CGCGGCTCGC GCCGGCGGTG TTCGGCCGGC TCGGCAACAA CGGCGTGCCG CGTGCGGCGC TGTGGATCTC GACCAGCGGC GTCGCGGTCG CGGCCGTGAT GGTCGCGCTG TCGCCCGACA CCGCGTTTAC CGTGATGATG GCGATCGCGA TGTTCGGCGC GCTGTTCACG TGGCTGATGA TCTTCGTCAC GCACCTGCGC TTTCGCGCGC GGTATCGCGG CCCGGCGCTC GCATTCCGGA TGTGGGGCCA CCCGTTCGGC AGCGTGCTCG GTGCGGGGCT CGTGGGCGCA GTCCTGCTCA CGACCGCGTT CACGCGCGAA TTCCGGATGA CGATGGTGGT CGGCGTCGTG TTCGTCGTGC TGCTGACGGT CGCGTACGCG TTGCACTACC GGCATCAGCA CGCGCGTTGA
|
Protein sequence | MTQQQRSFDN IVAREQGLRH ALTSGQMAMI AIGGAIGTGL FLGSGFAIGL AGPSVLLSYA IGALIALLLM GALAEMTVAH PTAGSFGAYA EHYVGPLAGF LVRYAYWFAV VFAIGTEISA IAVFMKYWFP AVPGWYWVIG FSALLIAVNL ASVTLYGSVE YAFSLLKIAA IVVFIVLGAY LVWSAPAAAG IGFANYTAHD GFMPKGPWGT WVAVIVAIFS YMSIEAVAIA AGEARDPQHA VTRAFRSTVF RLVLFYLLTL SLMLAIVPWT QAGTDESPFV KVMAATHVPY AAGVINFVLL IAALSAMNSQ LYVTTRMMFS LSRARLAPAV FGRLGNNGVP RAALWISTSG VAVAAVMVAL SPDTAFTVMM AIAMFGALFT WLMIFVTHLR FRARYRGPAL AFRMWGHPFG SVLGAGLVGA VLLTTAFTRE FRMTMVVGVV FVVLLTVAYA LHYRHQHAR
|
| |