Gene BamMC406_2431 details

Gene Information

• Locus tag: BamMC406_2431
• Symbol: lspA
• ID: 6177350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria MC40-6
• Kingdom: Bacteria
• Replicon accession: NC_010551
• Strand: +
• Start bp: 2700095
• End bp: 2700595
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641682207
• Product: lipoprotein signal peptidase
• Protein accession: YP_001809125
• Protein GI: 172061473
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.470208
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 2
• Fosmid unclonability p-value: 0.00000000640597
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCAAAAA CCCTGTCGAA GCCGGCCAGC GGCGCGCTCG CGCCCTGGCT CGGCATTTCG 
CTGATCGTGA TCCTGTTCGA TCAGCTGTCG AAGATCGCGA TCCTGAAAAC GTTCGCGTAC 
GGGGCGCAGC ATGCGCTGAC GTCGTTCTTC AGCCTCGTGC TGGTGTACAA CCGCGGCGCC 
GCGTTCGGCT TCCTGTCGAC CGCGAGCGGC TGGCAGCGCT GGGCGTTCAC CGCGCTCGGC 
ATCGGCGCGA CGCTCGTGAT CTGCTTCCTG CTGCGCCGCC ACGGCCAGCA GCGGCTGTTC 
AGCCTGTCGC TCGCGCTGAT CCTCGGCGGC GCGCTCGGCA ACGTGATCGA TCGGCTGGTC 
TACGGCCACG TGATCGACTT TCTCGATTTC CACGTCGGCG GCTGGCACTT CCCGGCGTTC 
AACCTCGCCG ATTCCGCGAT CACGGTCGGC GCGGTGCTGC TGGTCTACGA CGAACTGCGT 
CGCGTGCGCG GCTCGCGCTG A 

 

Protein sequence

MAKTLSKPAS GALAPWLGIS LIVILFDQLS KIAILKTFAY GAQHALTSFF SLVLVYNRGA 
AFGFLSTASG WQRWAFTALG IGATLVICFL LRRHGQQRLF SLSLALILGG ALGNVIDRLV 
YGHVIDFLDF HVGGWHFPAF NLADSAITVG AVLLVYDELR RVRGSR