| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2427 |
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| Symbol | |
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| ID | 6177332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2694115 |
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| End bp | 2695377 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641682203 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001809121 |
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| Protein GI | 172061469 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.895988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000717597 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTGC ACGGATTCCT GATTGGCCAG ACCGAGACCT TGCTGGCGGA GGTGCTGAAG
TTCACCGGCC CCGCCGACGC GACGACGAGC CGGTTCTTCC GCGCGCACCC GAAGCTCGGC
CACGCCGAGC GCGGCGTGAT CGCCGAGGCG GTGTTCGCGG TGCTGCGCCG GAAGATGGAG
TTTTCGCACC TCGCCGAGAG CGGCACGGGC AGCCCCGCAC GGCGCCTCAC GCTGCTGGGC
CTGATGCAGA CGCTCGGCCG CAATGCGCTG AAGCCGTTCG TGTCCGACAC GGAGGCCGCA
TGGCTCGAGC ACGTGTCGAA GATCGATCCG GCGAGCCTGC CGGTGCGCGT GCGCACGAAC
CTGCCGGACT GGATCTACCA GGCGCTGTCG GCCCGTTTCG ACGCCGAGGA GCTCGCGCAG
CTCGCCGCCG CGCTGAATTA CCCGGCGCCG CTCGACCTGC GCGCCAACGC GCAGAAGGCG
ACGCGCGACC AGGTGATCGA CGCGCTGCGC GCGGAGGGCA TCGACGCGGG CGAGACGCCG
TTCGCGCCGC AGGGCGTGCG CGTCGTCGGC AAGCCGGCGC TCACGCGCCT GCAGGTGTTC
CAGGAAGGGC AGATCGAGGT GCAGGACGAG GGCAGCCAGC TGCTGTGCTC GCTGGTCGCG
CCGCGCCGCG GCGAGATGAT CGTCGATTTC TGCGCGGGCG CCGGCGGCAA GACGCTCGCG
CTCGGCGCGA TGATGCGCTC GACCGGGCGC CTTTACGCGT TCGACGTGTC GGAAAAGCGC
TTGACCAAGC TCAAGCCGCG CCTCGCGCGC AGCGGGCTGT CGAACGTGAA CCCGGTGCTG
ATCGACAGCG AGCACGATGC GAAGATCAAG CGGCTCGCCG GCAAGATCGA CCGCGTGCTG
GTCGACGCGC CGTGCAGCGG CCTCGGCACG CTGCGCCGCA ATCCCGACCT GAAGTGGCGC
CAGACGCGCA CGTCGATCGA GGAGCTCACG CCGAAGCAGG CGTCGATCCT CGCGAGCGCC
GCGCGTCTCG TGAAGAAGGG CGGCCGGCTC GTGTACGCGA CCTGCAGCGT GCTCCACGCG
GAGAACGAAG CAATCGTCGA GCAGTTCCTG GCCGACCATC CGGAGTTCGT GCTGGTGCCC
GCGCAGCAGG TGCTGGCCGA CCAGCGCATC GCGATCGAGA CCGGCGACTA CCTGTCGCTG
TGGCCGCACC GCCACGCGAC CGACGGCTTC TTCGCCGCGG TGCTCGAGCG GCGCGCGCAG
TAA
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| Protein sequence | MKLHGFLIGQ TETLLAEVLK FTGPADATTS RFFRAHPKLG HAERGVIAEA VFAVLRRKME
FSHLAESGTG SPARRLTLLG LMQTLGRNAL KPFVSDTEAA WLEHVSKIDP ASLPVRVRTN
LPDWIYQALS ARFDAEELAQ LAAALNYPAP LDLRANAQKA TRDQVIDALR AEGIDAGETP
FAPQGVRVVG KPALTRLQVF QEGQIEVQDE GSQLLCSLVA PRRGEMIVDF CAGAGGKTLA
LGAMMRSTGR LYAFDVSEKR LTKLKPRLAR SGLSNVNPVL IDSEHDAKIK RLAGKIDRVL
VDAPCSGLGT LRRNPDLKWR QTRTSIEELT PKQASILASA ARLVKKGGRL VYATCSVLHA
ENEAIVEQFL ADHPEFVLVP AQQVLADQRI AIETGDYLSL WPHRHATDGF FAAVLERRAQ
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