| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2426 |
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| Symbol | |
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| ID | 6177333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2692714 |
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| End bp | 2694096 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682202 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001809120 |
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| Protein GI | 172061468 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.610338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000133571 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGAGTC TGCAAAGCCG CCTGCTGTCG CGCCGGCTGG CCTCGGTGAT TCGCGATTTC
CACCAGCCGG TGATGATCTG GCAGGCGGCG ATCCTCGGCG GCGCACTCTG TTTCGCCTGG
CTGGCCGCGC GCTTCGTGCA CGGCCGGATC GATGCGCGCC GCACGGCGTC CGGACGAGCG
CCCGGGGCGG GCTCGGATAG CCTGAAGCGC GCGCTGTTTC CGTTGTTCGG CGGCATTTTC
GTCGGCGTCG CGCAGCTCGC GTTCGAGCCG TTCATGTCGA CGTCGCTGCT GTCGCTCGCG
CTCGTGCCGC TGTTCGGCAT CGGGCTGATC TACGTGCTGT TCTTCTTCGC GCGGCGCGTG
TTCGCGCGCG ACGGCCACAC GCATGCGTGG CTGTCGATCG TCGAGAAGAT CGTGTCGACC
ATCGTGTGGG CCGCGATGGT GCTGACCGTG CTCGGCATCC AGCGCGACGT GCTCGGCTGG
CTCGACAGCG TGCAGTTTCG CGTGGCCAAT GCGCATCTCA CGCTGCTGTC GGTGATCTCC
GGCGCGCTGT GGGTGTGCGT GACGCTGATG GTCGCGATGT GGCTCGGCTC GGTGCTCGAG
GATCGCCTCG CGCGCGCGAG CACGCTCGAC GCGAACCTGA AGGTCGTGCT GTCGCGGGTC
GGCCGCGCGC TGCTGGTGTT CGCGGCGATC CTGATCGGGC TGTCGCTCGT CGGCATCGAC
GTGACGGTGC TCGGCGTGTT CGGCGGTGCG TTGGGCGTCG GCCTCGGCTT CGGCCTGCAG
AAGGTCGCCA GCAATTACGT GTCGGGCTTC ATCATCCTGC TCGATCGCTC GCTGCGGCTC
GGCGACGCGA TCAGCGTCGG CGGCTTGCAG GGCGTCGTCA CGCAGATCCG CACGCGCTAT
ACGGTCGTGC GTGGCCTCGA CGGCAACGAG ACGCTGATCC CGAACGAGAA GCTGATCACG
GACGTCGTGC AGAATCAGTC GTCGTACCTG ACGCGCGGCT ACGCGAAGGT CGCCGTGCAG
GTCGCCTATA CGAACGACGT CGAGCAGGCA CTGGCGGTGC TGGCAGAGGC CGCGAAGGGC
GTGCCGCGCG TGCTCGCGGA GCCGGCGCCG GCCCCGTACC TGGTCGGCTT CGGCGCGGAC
GGGATCGATC TGGAGCTCGG TTTCTGGATC GAGGATGCGG CCACGGGCAC GTCGGGCGTG
CGTTCGGCCG TGAACCGCAA CATCTGGCGG CTGTTCGGCG AGCACGGGAT CTCGATCCCG
TTCCCGCAGC GCGAAGTGCG CGTGGTCGGC CTGCCCGATG GTCTTGCGGC AACTGGCGTG
GTGGCGAAGG GCTTGCCCGT GGCCGGCGTC GGGACGGTGG ACGGGCAGGC GTCGGCGGCC
TAG
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| Protein sequence | MESLQSRLLS RRLASVIRDF HQPVMIWQAA ILGGALCFAW LAARFVHGRI DARRTASGRA
PGAGSDSLKR ALFPLFGGIF VGVAQLAFEP FMSTSLLSLA LVPLFGIGLI YVLFFFARRV
FARDGHTHAW LSIVEKIVST IVWAAMVLTV LGIQRDVLGW LDSVQFRVAN AHLTLLSVIS
GALWVCVTLM VAMWLGSVLE DRLARASTLD ANLKVVLSRV GRALLVFAAI LIGLSLVGID
VTVLGVFGGA LGVGLGFGLQ KVASNYVSGF IILLDRSLRL GDAISVGGLQ GVVTQIRTRY
TVVRGLDGNE TLIPNEKLIT DVVQNQSSYL TRGYAKVAVQ VAYTNDVEQA LAVLAEAAKG
VPRVLAEPAP APYLVGFGAD GIDLELGFWI EDAATGTSGV RSAVNRNIWR LFGEHGISIP
FPQREVRVVG LPDGLAATGV VAKGLPVAGV GTVDGQASAA
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