Gene BamMC406_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2423 
Symbol 
ID6177409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand- 
Start bp2688895 
End bp2689908 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID641682199 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_001809117 
Protein GI172061465 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.221535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00101882 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGATT CCCGCGCCCA CATCCGTTCG CTGTCCTCCG AAGCCGGCGC TGCGGCGCTC 
ACGCTGGTCC CAGGCACGGC GCCTTCCGAG GGGAAGGCCG CGGTGCTTGA GGGGGCCGCG 
CCGGAAGGCG CCGTGACGAC CGCAGTCTCC CCGCTGTTCG ACACCGTCCG CGCACAATAC 
GGGGCGGCAT TCGACGAAGC GATCGCGCGC AACGTGGCCG ATGCGATCGC CGAAGACGTC 
GGCACCGGCG ACCAGACCGG GCGGCTCGTG CCGGCCGGCG AGCGGCGCCG CGCGCGCATC 
ATCGTGCGCG AGGAAGCGGT GCTGTGCGGC GTGCCGTGGT TCGAGGCCGT CATCGCGCGG 
ATCGATCCGT CGATCGTCGT GCAGTGGCGC TATCGCGAAG GCGAGCGGAT GACGCCGGAT 
TCGACCGTCT GCGAGCTCGA AGGGCCGGCG CGGGCACTGT TGACGGCCGA GCGCAACGGG 
CTGAATTTCC TGCAACTGCT GTCGGGCGTC GCGAGCGCGA CGCGCCGTTA CGTCGATCGC 
GTCGAAGGCA CGCGCGCGAA GATCCTCGAT ACGCGCAAGA CGCTGCCGGG CCTGCGGCTC 
GCGCAGAAGT ACGCGGTGCG GGTCGGCGGC GGCGAGAACC AGCGTCTCGC GCTGTACGAC 
GGCATCCTGA TCAAGGAAAA CCATATCGCG GCAGCCGGCG GCGTCGGCGA AGCCCTCGAT 
GCGGCGTTCG CGCTGGAGTC GGGCGTGCCG GTGCAGATCG AAGTCGAGAC GCTCGCGCAG 
CTCGACACGG CGCTCGCGCA TGGCGCGCAA TCGGTGCTGC TCGACAACTT TACGCTCGAC 
ATGATGCGCG AAGCGGTGCG CGTCGCGGCC GGCAAGGCCG TGCTCGAAGT GTCGGGCGGT 
GTCAATTTCG ATACGGTGCG CACGTTCGCG GAAACGGGCG TCGACCGCAT CTCGATCGGC 
GCGCTGACGA AGGACGTGCG CGCGACCGAC TATTCGATGC GGATCGTCGA CTGA
 
Protein sequence
MNDSRAHIRS LSSEAGAAAL TLVPGTAPSE GKAAVLEGAA PEGAVTTAVS PLFDTVRAQY 
GAAFDEAIAR NVADAIAEDV GTGDQTGRLV PAGERRRARI IVREEAVLCG VPWFEAVIAR 
IDPSIVVQWR YREGERMTPD STVCELEGPA RALLTAERNG LNFLQLLSGV ASATRRYVDR 
VEGTRAKILD TRKTLPGLRL AQKYAVRVGG GENQRLALYD GILIKENHIA AAGGVGEALD 
AAFALESGVP VQIEVETLAQ LDTALAHGAQ SVLLDNFTLD MMREAVRVAA GKAVLEVSGG 
VNFDTVRTFA ETGVDRISIG ALTKDVRATD YSMRIVD