| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2417 |
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| Symbol | ispH |
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| ID | 6177155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2684046 |
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| End bp | 2685026 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682193 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001809111 |
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| Protein GI | 172061459 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.266913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00272207 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACCA CCGATACGCT GTCCGGGCAG ACCGTCGCCG CCGATGCCGA AATCCTGCTG
GCCCAGCCGC GCGGCTTCTG CGCAGGGGTC GACCGCGCCA TCGAGATCGT CGAGCGCGCG
ATCGCGATGC ACGGTGCGCC GATCTACGTC CGTCACGAGA TCGTCCACAA CAAGTACGTG
GTCGAGGATC TGAAGAAGAA AGGCGCGATC TTCGTCGAGG AACTCGAGGA AGTGCCGGCC
GGCAACACCG TGATCTTCAG CGCGCACGGC GTGTCGAAGG CCGTGCGCGA CGAAGCGGAC
GTGCGCGGGC TGCGCATTTA CGACGCAACC TGCCCGCTCG TCACGAAGGT GCATGTCGAA
GTGGCCAAGA TGCGCCAGGA CGGCGTCGAC ATCGTGATGA TCGGCCACAA GGGCCATCCG
GAAGTCGAGG GCACGATGGG GCAGGTCGAG CGCGGCATGC ATCTCGTCGA AAGCGTCGAA
GATGTCCAGA AGCTCGAGCT CGCCGATCCC GAGCGCATCG CGCTCGTCAC GCAGACGACG
CTGTCCGTCG ACGACGCGGC CGAGATCATC GGCGCGCTGA AGTCGAAGTA TCCGAAGATC
CGCGAGCCGA AGAAGCAGGA CATCTGCTAC GCGACGCAGA ATCGCCAGGA TGCGGTGAAG
TTCATGGCGC CGCAGTGCGA CGTCGTGATC GTCGTCGGCA GCCCGAACAG CTCGAATTCG
AGCCGCCTGC GCGAAGTGGC CGAGAAGCGC GGCGTGGCCG CGTACATGGT CGACGCGCCC
GACCAGATCG ATCCCGCGTG GGTCGCCGGC AAGCGCCGCA TCGGCGTGAC GGCCGGCGCA
TCGGCGCCCG AAGTGCTCGC CCAGGCCGTG ATCGCACGGC TGCGCGAGCT CGGCGTGCGC
AACGTGCGCG CGCTCGACGG CATCGAGGAA AACGTGTCGT TCCCGCTGCC GCGCGGCCTG
AATCTGCCGC CCGCCGTCTG A
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| Protein sequence | MSTTDTLSGQ TVAADAEILL AQPRGFCAGV DRAIEIVERA IAMHGAPIYV RHEIVHNKYV
VEDLKKKGAI FVEELEEVPA GNTVIFSAHG VSKAVRDEAD VRGLRIYDAT CPLVTKVHVE
VAKMRQDGVD IVMIGHKGHP EVEGTMGQVE RGMHLVESVE DVQKLELADP ERIALVTQTT
LSVDDAAEII GALKSKYPKI REPKKQDICY ATQNRQDAVK FMAPQCDVVI VVGSPNSSNS
SRLREVAEKR GVAAYMVDAP DQIDPAWVAG KRRIGVTAGA SAPEVLAQAV IARLRELGVR
NVRALDGIEE NVSFPLPRGL NLPPAV
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