| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2399 |
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| Symbol | |
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| ID | 6176999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2667856 |
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| End bp | 2668593 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682175 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001809093 |
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| Protein GI | 172061441 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.912792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAT CGAAACAGGT CGCCCTCGTC ACGGGCTCGT CGCGCGGCAT CGGCGCGGAA
ATCGCCCGCC GGCTCGCCCG GGACGGCTTC CGGGTCGTCG TGAACTACGC CGGCGGCGCC
GGCCCGGCGC GCGAAGTGGT CGACGCGATC GCCGCCGACG GCGGCGAGGC CATCGCGGTA
CAGGCGGACA TCGCCGACCC CGCGGCGGTG GCCGCGCTGT TCGAGGCGGC CGAGCAGGCG
TTCGGGCGCA TCGACGTGGT CGTCAACAGC GCGGGCGTCA TGAAGCTCGG TGCAATCGCC
GACTACGACG ACACGACGTT CGACCAGACC GTCGCGATCA ACCTCAAAGG CACCTTCAAC
GTCAGCCGCG AGGCGGCAAA GCGCGTGCGC AGCGGCGGCC GCATCGTCAA CCTGTCGTCG
ACGATGGTCG GCGTGCGTCT GCCCACCTAC GGCGTGTACG TCGCGACCAA GGCAGCCGTC
GAGGGACTGA CGCAGGTCCT CGCGCAGGAA ATGCGCGGCC GCGGCATCAG CGTGAACGCC
GTCGCGCCGG GGCCGGTCGC GACCGAGCTG TTCCTCGAGG GCAAGAGCCC CGAGCAGGTC
GATCGCCTGG CGAAGATGAA CCCGCTCGAG CGGTTGGGCC AGCCCGCGGA CATCGCCGGC
GTCGTCGCGT TCCTCGCCGG CCCCGACGGC GCGTGGGTCA ACGGCCAGAT CCTGCGCGCC
AACGGCGGCA TGTGCTGA
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| Protein sequence | MNASKQVALV TGSSRGIGAE IARRLARDGF RVVVNYAGGA GPAREVVDAI AADGGEAIAV
QADIADPAAV AALFEAAEQA FGRIDVVVNS AGVMKLGAIA DYDDTTFDQT VAINLKGTFN
VSREAAKRVR SGGRIVNLSS TMVGVRLPTY GVYVATKAAV EGLTQVLAQE MRGRGISVNA
VAPGPVATEL FLEGKSPEQV DRLAKMNPLE RLGQPADIAG VVAFLAGPDG AWVNGQILRA
NGGMC
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