| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2379 |
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| Symbol | |
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| ID | 6176841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2647875 |
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| End bp | 2649548 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682154 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001809073 |
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| Protein GI | 172061421 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTACA ACCGTCGCTC GAAGCACATC ACGCAAGGCG TGGCCCGTTC GCCGAACCGC
TCGATGTATT ACGCTCTCGG CTACCAGAAG GACGATTTCG ACAAGCCGAT GATCGGCATC
GCGAACGGTC ACTCGACGAT CACGCCGTGC AACTCGGGCC TGCAGCGGCT GTCGGACGCG
GCCGTCGCGG CGATCAAGGC GGCCGACGCG AACCCGCAGA TCTTCGGCAC GCCCACGATC
TCGGACGGCA TGTCGATGGG CACCGAGGGG ATGAAGTACT CGCTGGTGTC GCGCGAAGTG
ATCGCCGACT GCATCGAGAC CTGCGTCCAG GGCCAGTGGA TGGACGGCGT GGTGGTGGTC
GGCGGCTGCG ACAAGAACAT GCCGGGCGGG ATGATCGCGC TCGCGCGCCT GAACGTGCCG
GGCATCTACG TGTACGGCGG CACGATCCGC CCCGGCCACT GGAAGGGCCG CGACCTGACG
ATCGTGTCGT CGTTCGAGGC GGTCGGCGAG TTCACCGCCG GCCGGATGTC GCAGGAGGAT
TTCGAAGGAG TCGAGAAGAA CGCGTGCCCG AGCTCGGGGT CGTGCGGCGG GATGTACACG
GCGAACACGA TGAGCTCGTC GTTCGAGGCG CTCGGCATGT CGCTGATGTA CTCGTCGACG
ATGGCGAACC CCGACCAGGA GAAGGTCGAT TCGGCCGCCG AATCGGCGCG CGTGCTGGTC
GAGGCCGTGA AGCGCGACCT GAAGCCGCGC GACATCATCA CGAAGGCATC GATCGAGAAC
GCGGTGTCGC TGATCATGGC CACCGGCGGC TCGACCAACG CGGTGCTGCA CTATCTCGCG
ATCGCGCACG CGGCCGAGAT CGACTGGACG ATCGACGACT TCGAGCGCAT CCGCAAGCGC
GTGCCGGTGC TCTGCGACCT GAAGCCGTCG GGTCAGTACG TCGCGACCGA TCTTCACCAG
GCAGGCGGCA TCCCGCAGGT GCTGCGCATC CTGCTCGATG CGGGGCTGCT GCACGGCGAC
TGCATGACGA TCACCGGCCG CACGATCGCC GAGGAACTGA AGGACGTGCC ATGCGTGCCG
CGCGCGGATC AGCAGGTGAT CTTCCCGATC GATCGCGCGC TGTACAAGGA AGGGCATCTG
GCGATCCTGA AGGGCAACCT CGCGGAAGAC GGCGCGGTCG CGAAGATCAC CGGCCTGAAG
AACCCGGTGA TCACGGGCCC CGCGCGCGTG TTCGACGACG AGCAAAGCGC GATGGATGCG
ATCCTCGGCG ACCGGATCCG CGCGGGCGAC GTGCTGGTGC TGCGCTATCT CGGCCCGCAG
GGCGGCCCCG GCATGCCGGA AATGCTCGCG CCTACATCGG CGATCATCGG CAAGGGGCTC
GGCGAATCGG TCGGCTTCAT CACGGACGGC CGCTTCTCGG GCGGTACCTG GGGGATGGTG
GTCGGCCACG TCGCGCCCGA GGCGTTCGTC GGCGGCACGA TCGCGCTCGT GCAGGAAGGC
GATTCGATCA CGATCGACGC GCACCAGCTG GTGCTGCAGC TGAACGTCGA CGACGCGGAG
CTCGCGCGCC GCCGCGCCGC GTGGAAGCAG CCGGCGCCGC GCTACACGCG CGGCGTGCTC
GCCAAGTATG CGGCCCTCGC CCGCCCGGCG AATCAGGGCG CCGTCACCGG TTGA
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| Protein sequence | MPYNRRSKHI TQGVARSPNR SMYYALGYQK DDFDKPMIGI ANGHSTITPC NSGLQRLSDA
AVAAIKAADA NPQIFGTPTI SDGMSMGTEG MKYSLVSREV IADCIETCVQ GQWMDGVVVV
GGCDKNMPGG MIALARLNVP GIYVYGGTIR PGHWKGRDLT IVSSFEAVGE FTAGRMSQED
FEGVEKNACP SSGSCGGMYT ANTMSSSFEA LGMSLMYSST MANPDQEKVD SAAESARVLV
EAVKRDLKPR DIITKASIEN AVSLIMATGG STNAVLHYLA IAHAAEIDWT IDDFERIRKR
VPVLCDLKPS GQYVATDLHQ AGGIPQVLRI LLDAGLLHGD CMTITGRTIA EELKDVPCVP
RADQQVIFPI DRALYKEGHL AILKGNLAED GAVAKITGLK NPVITGPARV FDDEQSAMDA
ILGDRIRAGD VLVLRYLGPQ GGPGMPEMLA PTSAIIGKGL GESVGFITDG RFSGGTWGMV
VGHVAPEAFV GGTIALVQEG DSITIDAHQL VLQLNVDDAE LARRRAAWKQ PAPRYTRGVL
AKYAALARPA NQGAVTG
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