Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2378 |
Symbol | |
ID | 6176842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2646822 |
End bp | 2647739 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641682153 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001809072 |
Protein GI | 172061420 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATC CAACACCCGA CCTGCGCCAG TGGCGCTATT TCGTGACCGT TGCCGACGAG CGCCATTTCG GCCGCGCGGC CGAGCGCCTG TCGATGACGC AGCCGCCGCT GTCGCAGGCG ATCCGGGCGC TCGAGGAGGC GCTCGGCGTC GCGCTGTTCG TGCGTACCAA GCGCTCGGTC GCGCTGACGG CGGTCGGCGC GGCGCTGCTG CCCGACGTGC GCCGGTTGCT CGCGTCGGCC GACGCGCTGC CGCCGCTCGC GCGGCGCCTC GCGCGGGGCG AAGCCGGCTC GCTGTCGCTC GCGTTCGTGT CGACCGCCGA TTACGGGCTG CTGCCGTCGC TGCTGCGCGC GTTCGGCGCG CGCTATCCGC AGGTGCGGCT GCAGCTCGCG GAGGCGACGA GCGACGTGCA GATCGACGAA CTCGTCGCGG GACGCATCGA CGCGGGGCTC GTGATTCCAC CGGTGCCGCC GCGGCACGCG GCCGGGCTGT CGTACCTGCC GGTCGTGCGC GAGCCGCTGG TGGTCGCGAT GCCGGCGGCC GCGGCGCCCG ATGGGCCCGA GGACGAGCCC GTGCATCTGG CTGACCTGGC CGCGCTGCCG CTCGTGATCT TCCCGCGTCG TTTGGCGCCC GGCTTTTATG ACATCATTAC GGGCTGCTAC GGCGCGGCGG GGGAAACCCC GCACATCGGC CAGGAGGCGA TCCAGATGCA GACGATCGTC AGCCTCGTGT CGGCCGGCAT GGGCGTCGCA CTGGTGCCGC AATCGCTGCG TAACCTGCGG CGCACCGGCG TGGTCTACCG GCCGCTCGCC GGCGACGCGC CGGTCGTCGA GACGGGCCTC GTGTGGCGCA CGGGCGATGT CAGTCCCGTG CTTGCCGGCT TCATCGACGT CGTGCGCGCG CACGGTCTCG CCACGTGA
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Protein sequence | MADPTPDLRQ WRYFVTVADE RHFGRAAERL SMTQPPLSQA IRALEEALGV ALFVRTKRSV ALTAVGAALL PDVRRLLASA DALPPLARRL ARGEAGSLSL AFVSTADYGL LPSLLRAFGA RYPQVRLQLA EATSDVQIDE LVAGRIDAGL VIPPVPPRHA AGLSYLPVVR EPLVVAMPAA AAPDGPEDEP VHLADLAALP LVIFPRRLAP GFYDIITGCY GAAGETPHIG QEAIQMQTIV SLVSAGMGVA LVPQSLRNLR RTGVVYRPLA GDAPVVETGL VWRTGDVSPV LAGFIDVVRA HGLAT
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