| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2364 |
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| Symbol | cobD |
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| ID | 6178359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2634775 |
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| End bp | 2635719 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641682138 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_001809058 |
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| Protein GI | 172061406 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATGC TGTCGCTGCC CGTCGTCGCG ATGCTCGCGG TCGCGGCCGT GATCGTCGAT
CGCATCGTCG GCGAACCGGC CGGCTGGCAT CCGCTCGTCG CGTTCGGCCG GCTCGCCGGC
CGCATCGAAG CCGCGCTGAA CACGGGCCGG CGCGGCCGCG TGGTCGGCGT CGCCGCATGG
GTCGCGGCGG TGGTGCCGCC GGTGGCCGTC GCCGCGTGGC TCGCGGCCGT GCTGCCCTGG
CCGCTCGCGG CCGCGCTGCA CGTCGCGCTG CTGTGGTTCG CGCTCGGCGC GAAGAGCCTC
GCCGATCACG TCGCCCCGAT CGCCGCCGCG CTGCTGCGGC ACGATCTCGA CGCCGCACGC
GCGCTGACCG CGCGCATCGT GTCGCGCGAC ACGAGCGAAG CCGACGAAGG CGCGCTGTCG
CGGGCGGCCG TCGAATCGGC GCTCGAGAAC GGCAACGACG CGATCTTCGG CGCGCTGTTC
TGGTTCGTGG TCGCGGGCGG CCCCGGCGCG CTGCTGTTCC GGCTCGCGAA CACGCTCGAC
GCGATGTGGG GGTACCGCAC GCCGCGCTTC CTGACCTTCG GCTGGGCCGC CGCGCGCCTC
GACGACGCGC TCAACTGGAT TCCCGCCCGC CTCACCGCCG CGAGCTACGC GCTGCTCGGC
GATACGGCCG CCGCGTGGCG CTGCTGGCGC ACTCAGGCAC GCCACTGGGA CAGCCCGAAC
GCCGGCCCCG TGATGGCCGC GGGCGCCGGC AGCCTGAACG TGCAGCTCGG CGGCCCGGCC
GTCTATCACG GCGAAATCGA AGACCGTCCC GCGCTCGGCA CCGGCGCGAG CGCGACGGCC
GTGCACGTCG TCGCCGCGCT GTCGCTCGTC ACGCGCACGC TCGCGCTGTG GCTCGCGCTG
CTCGTCGCGA GCGGCGCACT CATCCTCGCT ACCCATCATG TCTGA
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| Protein sequence | MLMLSLPVVA MLAVAAVIVD RIVGEPAGWH PLVAFGRLAG RIEAALNTGR RGRVVGVAAW
VAAVVPPVAV AAWLAAVLPW PLAAALHVAL LWFALGAKSL ADHVAPIAAA LLRHDLDAAR
ALTARIVSRD TSEADEGALS RAAVESALEN GNDAIFGALF WFVVAGGPGA LLFRLANTLD
AMWGYRTPRF LTFGWAAARL DDALNWIPAR LTAASYALLG DTAAAWRCWR TQARHWDSPN
AGPVMAAGAG SLNVQLGGPA VYHGEIEDRP ALGTGASATA VHVVAALSLV TRTLALWLAL
LVASGALILA THHV
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