Gene BamMC406_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2357 
SymbolpanC 
ID6178321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2629588 
End bp2630427 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content68% 
IMG OID641682131 
Productpantoate--beta-alanine ligase 
Protein accessionYP_001809051 
Protein GI172061399 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.705598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.238844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCA TCAGCTCGAT CCAGGAACTG CGCGACCAGT TGCGCGGCCA GAACCGCACG 
GCGTTCGTGC CGACGATGGG CAACCTGCAC GAAGGTCACC TGTCGCTGAT GCGCCTCGCG
CGCCAGCACG GCGACCCGGT CGTGGCGAGC ATCTTCGTCA ACCGGCTGCA GTTCGGCCCG
AACGAGGATT TCGACAAATA TCCGCGCACG CTGCAGGACG ACATCGAGAA GCTGCAGAAG
GAAAACGTCT ACGTGCTGTT CGCGCCGACC GAGCGCGACA TGTATCCGGA GCCGCAGGAG
TACCGCGTGC TGCCGCCGGA CGACCTCGGC GGGATCCTCG AGGGCGAGTT CCGCCCCGGC
TTCTTCGCCG GCGTGTGCAC GGTCGTCACG AAGCTGATGT CCTGCGTGCA GCCGCGCGTC
GCCGTGTTCG GCAAGAAGGA CTACCAGCAG CTGATGATCG TGCGCCGGAT GTGCCAGCAG
CTCGCGCTGC CGGTCGACAT CATCGCGGCC GAGACGGTGC GCGACGAGGA CGGCCTCGCG
CTGTCGTCGC GCAACCGCTA TCTGACGACC GACGAGCGCA AGGAAGCGCC CGAACTCGCG
AAAACGCTGC AGCGCGTGCG CGACGGCGTG CTCGGCGGCG AACGCGACCT CGGCAAGCTC
GAGCAGACCG CGCGCACGCA CCTGGCCGAG CGCGGCTGGG CGCCCGACTA CATCTCGATC
CGCCGCCGCG CGAACCTGAT CGCGCCGAGC GCCGCCGAAC TCGAAGCCGG CGAGCCGCTC
GTCGTGCTCG CGGCCGCGAA GCTCGGCGCG ACGCGCCTGA TCGACAACCT GGAAATCTGA
 
Protein sequence
MKVISSIQEL RDQLRGQNRT AFVPTMGNLH EGHLSLMRLA RQHGDPVVAS IFVNRLQFGP 
NEDFDKYPRT LQDDIEKLQK ENVYVLFAPT ERDMYPEPQE YRVLPPDDLG GILEGEFRPG
FFAGVCTVVT KLMSCVQPRV AVFGKKDYQQ LMIVRRMCQQ LALPVDIIAA ETVRDEDGLA
LSSRNRYLTT DERKEAPELA KTLQRVRDGV LGGERDLGKL EQTARTHLAE RGWAPDYISI
RRRANLIAPS AAELEAGEPL VVLAAAKLGA TRLIDNLEI