Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2357 |
Symbol | panC |
ID | 6178321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2629588 |
End bp | 2630427 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682131 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_001809051 |
Protein GI | 172061399 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.705598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.238844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCA TCAGCTCGAT CCAGGAACTG CGCGACCAGT TGCGCGGCCA GAACCGCACG GCGTTCGTGC CGACGATGGG CAACCTGCAC GAAGGTCACC TGTCGCTGAT GCGCCTCGCG CGCCAGCACG GCGACCCGGT CGTGGCGAGC ATCTTCGTCA ACCGGCTGCA GTTCGGCCCG AACGAGGATT TCGACAAATA TCCGCGCACG CTGCAGGACG ACATCGAGAA GCTGCAGAAG GAAAACGTCT ACGTGCTGTT CGCGCCGACC GAGCGCGACA TGTATCCGGA GCCGCAGGAG TACCGCGTGC TGCCGCCGGA CGACCTCGGC GGGATCCTCG AGGGCGAGTT CCGCCCCGGC TTCTTCGCCG GCGTGTGCAC GGTCGTCACG AAGCTGATGT CCTGCGTGCA GCCGCGCGTC GCCGTGTTCG GCAAGAAGGA CTACCAGCAG CTGATGATCG TGCGCCGGAT GTGCCAGCAG CTCGCGCTGC CGGTCGACAT CATCGCGGCC GAGACGGTGC GCGACGAGGA CGGCCTCGCG CTGTCGTCGC GCAACCGCTA TCTGACGACC GACGAGCGCA AGGAAGCGCC CGAACTCGCG AAAACGCTGC AGCGCGTGCG CGACGGCGTG CTCGGCGGCG AACGCGACCT CGGCAAGCTC GAGCAGACCG CGCGCACGCA CCTGGCCGAG CGCGGCTGGG CGCCCGACTA CATCTCGATC CGCCGCCGCG CGAACCTGAT CGCGCCGAGC GCCGCCGAAC TCGAAGCCGG CGAGCCGCTC GTCGTGCTCG CGGCCGCGAA GCTCGGCGCG ACGCGCCTGA TCGACAACCT GGAAATCTGA
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Protein sequence | MKVISSIQEL RDQLRGQNRT AFVPTMGNLH EGHLSLMRLA RQHGDPVVAS IFVNRLQFGP NEDFDKYPRT LQDDIEKLQK ENVYVLFAPT ERDMYPEPQE YRVLPPDDLG GILEGEFRPG FFAGVCTVVT KLMSCVQPRV AVFGKKDYQQ LMIVRRMCQQ LALPVDIIAA ETVRDEDGLA LSSRNRYLTT DERKEAPELA KTLQRVRDGV LGGERDLGKL EQTARTHLAE RGWAPDYISI RRRANLIAPS AAELEAGEPL VVLAAAKLGA TRLIDNLEI
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