Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2353 |
Symbol | |
ID | 6178375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2622042 |
End bp | 2626124 |
Gene Length | 4083 bp |
Protein Length | 1360 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682127 |
Product | hypothetical protein |
Protein accession | YP_001809047 |
Protein GI | 172061395 |
COG category | [S] Function unknown |
COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.732619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.322584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAGG ACCCGAACGA CACGCCGCCG CCTCACGATC CGGATTCGCC CGAGCGCGCG CCCGACGCGC CGCGGCGCGC ACCGCGCCGC GGGCGGGCGG TCCGGGTCGT CGCGTGGACG CTCGCGACGG TCGTGCTGCT CGTCGTGCTG GCGGTCGGGC TCGTGCTGGC CGCCGCGACG ACCGAGCGCG GCACGCGGCT CGCCTGGCAG ACGGCCGTGC GCGTGCTGGG CGCTCGGCTG ACGGGCACGC TGGAAGGCGG CGCGCTCGCG ACCGGCGTGC GGCTGCGCGG CTTCGCGTGG ACGAGCCCCG GCGGCGCCGG CACCGAAGTG CGGATCGACC GGCTCGAGGG CCGCTGGGCG CTGACCCGCG CGCCGTGGCG ACTGTCTGTC GCGTACCTGC GCGCGGGCAC GATCGACGTG CGGATCGTGC CGGGGCCGTC GAAACCGGCC ACGACACCGC AGGACCTGAG CCTGCCGCTG CAGGTGCGGA TCGACGACCT GCGCGTCGAT CACCTGGCGA TCCACGAAGG CAGCTCGACG ACGCAGCTCG ACCATCTCGC GCTGAACGGC CGCAGCGACG GCCGTCACCA TGAACTCGCG CTCGACGGCG TCGACACGCC GTACGGCTCG CTGACCGCGC GCGCGAAGCT CGACGGCGTG AAGCCGTTCG CGCTGACGGG CAACGCGACC TACGTGGGCA AGCTCGCGGA CGAAGCGGTC AACGCGAGCG CGAACGTATC GGGTTCGCTC GAGGCGCTGG TCGCCGACGT CGCCGCGAGC GGGATGAAGC TGCACGGGCG CGCGCACGTC GAGGCCGCGC CGTTCGGCGC GGTGCCGCTC ACGCGGGCGT CGATCGCGTT CGAGCACGTG AATCCGCAGG CGATTTCGCC GGGCGCGCCG GCCGCCGATC TCGCGGTGCG CGCGGAGCTG GCGCCCGTGA CTGCGCCGGC CGGCGCCGCA CCGGCGCAGG GCTTCGCGGT GACGGGCCCC GTGTCGATCG TCAACGCGAA GCCCGGCTTG CTCGGCGAGC ACCTGCTGCC GGTCGTCGAC GCGCATGCGA CCGTGAATCT CGACGCGCAC GCGCAGCGGA TCGACGGCCT CGCGGTGAAG CTGATCCGCG ACGGCAGCGT GACCGGCAGC GGCACGCTGA CGGGCGGCAA GGGCCGCTTC GACCTGCAGG TCGCGAATCT CGACCTCAAT GCATTCGTCG CGCAATTGCG GCCGATGCGC CTCGGCGGCC CGCTCGGCGT GACGCTCGCG GGCGACGTGA CGACCGTCGA CTTCAACCTG AACGATCCGA AGCTCGCGCT CGGCGCGCGT GCGAAGGTCG CGCTGACCGC GCAGCAGACG GTGCTGACCG ATGCGCGCGT GACGGCCGGC AAGGGCCGTA TCGACCTGAC GGGCGTGTTC CGCCACGACG CGCATTCGAG CTACGACGCG AAGGCGACGC TGACGGCGTT CGATCCGCTG CTGCTCGCCG CGATGAATGC GCCGAGTGCG GCTGGCGGCA AGCCGGCCGC AAAAACGGCG GCAAAGCCGG CCAAGACGGC GAACGCGGCC AAAGCGACCA AGGCGCCGGT CAAGCACGGC GAGACGCGCG TATCGGGCAC GCTGACGGCC TCCGGCGCGT TCGCGCCGCA AGTGTCGACG AAGGCGACCT TCAAGCTCGG CGACAGCCTG TACGACGGCG TGCCGCTGAC CGGCGCCGGC GTCGTGCAGC TGGCCGGCCC GCGGATCCTG CCGAGCAACG CGACCCTGTC GATCGCGGGC AACCACGTCG ATCTGCGCGG CAGCTTCGGC GCGCCTGGCG ACCGGCTGCG CTTCGTCGTC GATGCGCCGC AGCTCGACCG GCTCGGCTTC GGCATGCAGG GGCTGGTGCA GGCGCAGGGC GAGCTGACCG GCAGCTTCGC GCATCCGAAC GTGACGGGCA CCTACAAGGC TCAGCACGTC GTGGTCGGCT CGAACCGGAT CGGCGCCGCG CAGGGCCGCG CCGACATCCG CGACGGCGCG CACGGCGCGC TCGTGTTCAC GGCCGACGCG ACCGACCTCG CGCTCGGCTC GCTGCAATTG AAATCGCTGC GCGCGAACCT CGACGGCACG CGCGCGAAGC ACACGCTCGA TGCGTCGGCG ATGGGGATCG CCGACGGCCG CGTGATCAAC CTGACGCTCG CGGCGAACGG CGGCGTGGTC GAGAACCGCG ACGGGATGCG CTGGGACGGC ACCGTCACGC GCCTCGCGAA CCGCGGCACG CCGGCGCTCG CGCTGCAGGC GCCGCTCACC ATATCGGCCG GTGCCGGCCG CGTGACGCTC GGCGCGACGC GGCTCACGCT CGAAGGCGCG TCGATCGACC TGAAGTCGTT CGTGTTCGAT CGCGGCCAGA TGCGCTCGGC AGGCTCCGTG CGCGATGCAT CGGTCGCGCG TTTCCTCGAG GTCCGCCAGG CGCTGACGGG CCAGCGGCCG CCGGTGCGTA CCGACGTCGT GCTCGATGCC GACTGGGACT TCTCGCTCGG CGCGAATGCG ACCGGCCATG TGCAGATGAA GCGGCGCGGC GGCGACGTGA CGATCGAGAG CGGCCGCGGC ATCGCGTCGC TCGGGCTGAC CGACCTGTCC GCGCGTGCGA CCTTCGCACC CGGCAACCGG CTCAACGTGG TGGCGCTCGC GAAGGCGAAC CGGATCGGCA CGCTCGACGC GAACGTCACC GTCCCGTTCG CGCTGCGCGA CGGCGTGTTC GGCGTCGTCG ACGATGGCCC GCTGTCGGGC CGCATCGACG CCGACATTCC GTCGCTGAAG GCGACCGGCA ACCTGTTCGG GCCGAGCTAC CTGCTCGGCG GGCGCGCGGC GCTGCACCTG ACGGTCGCGG GCACGCCGGT GAAGCCGAAC GTGTCGGGGA GCCTCACGGG CGACGACCTG TCCGCGACGC TGGTCGACCA GGGCGTGCAG CTGAAGGACG GCATCGTGCG CGTGAAGCTC GCGGAGAACC TCGTCGAATT CCAGCAGGTC GAGTTCCACG GCGGCGACGG CACGCTGCGC GCGATCGGCC GAGTGCGTCT CGACGGCGCG GCGCCGGACC TGACCGCGAG CATCGTCGCG GACAAGCTCG AGCTGTTCGC CGCCCCCGAC CGCAAGCTGT CGCTGTCGGG CAAGGCGACC GTCGCGAACG ACGGGCCGCG CGGCGCGTTG GCGATCGACG GCAAGTTCGT CGTCGACCGC GCGCTGTTCG ACCTGCCGGA GGACGGCGCG CCGCATCTGT CCGACGACGT CGTGATCGTG CGCCCGGACG GCACGGTGCG CGGCGACGTG CAGACGGGCA CCGCGGTCGC GAAGCCGCAG AAGGTCGACG AAAAGCCGGC GCCGTCGCTC GCGCCGCGCG CCAACATCGA CATCGGCCTC GGCAACAACT TCCGCTTCCG GGGCCACGGC GCGGACCTCG GGCTGCGCGG CACGATCACC GTGATGAGCG CGCCGGGCGT GCCGCTGCGC GCGGTCGGCA ACGTGCGCGT GACGGAGGGG TCGACCTATA CGTCGTTCGG CCGCAAGCTC GCCGTCGAGA ACGGGTTCTT CACGTTCAAC GGCCCGGTGT CGAATCCCGG CATCAACATC CTCGCGATGC GGCGCAACCA GGAGGTCGAG GCCGGCGTGC AGGTCGTCGG CACGATCCAG TCGCCGACGG TCAAGCTCGT GTCCGAGCCG AACGTCACCG ACAACGAGAA GCTGTCGTGG CTGCTGTTCG GTCATGGCAC CGACCAGGGC AACAACGTCG GCCAGCAGAA TGCGATGACC GCCGCGCTTG CGCTGCTCGG CAGCGCGACC GGCAAGCGGG TCGCGCAGAG CATCGGTCTC GACGAATTCT CGATCGGCCG CAGCGACGTC GGCCTGACCG ATGCGCAGGT CGTGCAGATC TCGAAGGCGA TCAACGAGCG CTTCGTGCTC GGTTACGAGC AAGGGCTGCA ATCGGCGAGC AACGCGTTCA AGGCGACGAT CAACCTGACG CGCTTCTGGT CGGTGTCCGC GTATGGCGGC ACGTTCCAGG GCGTCGACCT GAACTACACG CGGCGCTTCG ATCGCTGGTT CAGCCAGCGG TGA
|
Protein sequence | MTKDPNDTPP PHDPDSPERA PDAPRRAPRR GRAVRVVAWT LATVVLLVVL AVGLVLAAAT TERGTRLAWQ TAVRVLGARL TGTLEGGALA TGVRLRGFAW TSPGGAGTEV RIDRLEGRWA LTRAPWRLSV AYLRAGTIDV RIVPGPSKPA TTPQDLSLPL QVRIDDLRVD HLAIHEGSST TQLDHLALNG RSDGRHHELA LDGVDTPYGS LTARAKLDGV KPFALTGNAT YVGKLADEAV NASANVSGSL EALVADVAAS GMKLHGRAHV EAAPFGAVPL TRASIAFEHV NPQAISPGAP AADLAVRAEL APVTAPAGAA PAQGFAVTGP VSIVNAKPGL LGEHLLPVVD AHATVNLDAH AQRIDGLAVK LIRDGSVTGS GTLTGGKGRF DLQVANLDLN AFVAQLRPMR LGGPLGVTLA GDVTTVDFNL NDPKLALGAR AKVALTAQQT VLTDARVTAG KGRIDLTGVF RHDAHSSYDA KATLTAFDPL LLAAMNAPSA AGGKPAAKTA AKPAKTANAA KATKAPVKHG ETRVSGTLTA SGAFAPQVST KATFKLGDSL YDGVPLTGAG VVQLAGPRIL PSNATLSIAG NHVDLRGSFG APGDRLRFVV DAPQLDRLGF GMQGLVQAQG ELTGSFAHPN VTGTYKAQHV VVGSNRIGAA QGRADIRDGA HGALVFTADA TDLALGSLQL KSLRANLDGT RAKHTLDASA MGIADGRVIN LTLAANGGVV ENRDGMRWDG TVTRLANRGT PALALQAPLT ISAGAGRVTL GATRLTLEGA SIDLKSFVFD RGQMRSAGSV RDASVARFLE VRQALTGQRP PVRTDVVLDA DWDFSLGANA TGHVQMKRRG GDVTIESGRG IASLGLTDLS ARATFAPGNR LNVVALAKAN RIGTLDANVT VPFALRDGVF GVVDDGPLSG RIDADIPSLK ATGNLFGPSY LLGGRAALHL TVAGTPVKPN VSGSLTGDDL SATLVDQGVQ LKDGIVRVKL AENLVEFQQV EFHGGDGTLR AIGRVRLDGA APDLTASIVA DKLELFAAPD RKLSLSGKAT VANDGPRGAL AIDGKFVVDR ALFDLPEDGA PHLSDDVVIV RPDGTVRGDV QTGTAVAKPQ KVDEKPAPSL APRANIDIGL GNNFRFRGHG ADLGLRGTIT VMSAPGVPLR AVGNVRVTEG STYTSFGRKL AVENGFFTFN GPVSNPGINI LAMRRNQEVE AGVQVVGTIQ SPTVKLVSEP NVTDNEKLSW LLFGHGTDQG NNVGQQNAMT AALALLGSAT GKRVAQSIGL DEFSIGRSDV GLTDAQVVQI SKAINERFVL GYEQGLQSAS NAFKATINLT RFWSVSAYGG TFQGVDLNYT RRFDRWFSQR
|
| |