Gene BamMC406_2351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2351 
Symbol 
ID6179068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2620597 
End bp2621133 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content59% 
IMG OID641682125 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001809045 
Protein GI172061393 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0499113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.201839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGT ACACGGAGCA GTTCAAGGTA TCCATTGCAG AGGAGTACGA GTCCGGCCAC 
GCTGGGTTCC GTGAGATGTC CAAGCGCCAC GGCGTCGATG AGGCGACGAT CCGCAAGTGG
GTGGCGGCCC ATCGCATACA TGGTCCGGCA GGCTTGAAGA AGAAGTGCGA GCGCTACAGC
GCAGAGTTCA AGTTGCTTGT ACTGCAGCAA ATGCGTAGCG AGGGGTTGTC AGCGCGTGAG
ACGGCTGCAC GCTTCAACAT TAGGAACCGT ACGGCCATCG GCCAGTGGAA ACGCCAGTAT
GATGAAGGCG GTATAGACGC ACTGTCGCCG CGCCAGCGGG GGCGCCCCAG AAAGATGCCC
AAGCCACCGA TCACGCCACC GCCGCTACCC GAGGACGATA CGCGCTCCCG ACAGGAACTA
CTCGACGAGT TGAACTTCCT GCGCATGGAG AACGCGTACC TAAAAAAGCT CGAAGCCTTG
GCTCAAGCGC AGCAGCGATC AGCGCAACGC AAAAAGCGCA AATCGTGCTC GAGCTAA
 
Protein sequence
MSKYTEQFKV SIAEEYESGH AGFREMSKRH GVDEATIRKW VAAHRIHGPA GLKKKCERYS 
AEFKLLVLQQ MRSEGLSARE TAARFNIRNR TAIGQWKRQY DEGGIDALSP RQRGRPRKMP
KPPITPPPLP EDDTRSRQEL LDELNFLRME NAYLKKLEAL AQAQQRSAQR KKRKSCSS