Gene BamMC406_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2343 
Symbol 
ID6177934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2610472 
End bp2611155 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID641682117 
ProductHAD family hydrolase 
Protein accessionYP_001809037 
Protein GI172061385 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.187691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCT CCGCCGCGCT CTTCGACATG GACGGCCTGC TCGTCGATTC CGAGCGGACC 
ATCATGAACA CGTGGATCGA CGTGTCGACC GCGCACGGCG TCACGTTGAC CGAGATCGAC
TACCTGCAGA TCGTCGGGCG CTCGTTCGCC GAAGGCCAGG TGATTCTCGC GCGGCTGATC
GGCGACACCA ACACGTTCGA CGCCGTGCGC CTGCTCGTGC GCGAACAGCT CGCCGCGCCT
GAACCGCATC CGAAGTTTCC GCTGAAAGCA GGCGCGCTTG CGCTCCTCGA GGCGCTTGCG
CAGGCCGGCA TCCCGTGCGC GGTCGCGTCA TCGTCCGCGC GCGACGTGAT CCGTGCACGG
CTCGACGCGG TCGGCGTGCT GCCGTTCTTC CACGCGATCG CGGGCGGCGA CGAAGTCGCG
CGCGGCAAGC CCGATCCGGC CGTGTACCGG CTCGCGGCCG AGCGCCTCGG CGTGCCGGCG
CACGCGTGCG TCGCGTTCGA GGACAGCGAC TTCGGCGCGC TGTCGGCCGC CGGCGCGGGC
GCATCGGTCG TCACCGTGCC GGACCTGAAA GCGCCGACGC CCGAGATCGT CGCGCTGAGC
CTGCACGTGC TCACGTCGCT CGACGATGCG CTCGCGCTCG TGCCGTCGTG GTTCGGCGGC
CTCGACACGC AGCAATCCGC GTAA
 
Protein sequence
MTFSAALFDM DGLLVDSERT IMNTWIDVST AHGVTLTEID YLQIVGRSFA EGQVILARLI 
GDTNTFDAVR LLVREQLAAP EPHPKFPLKA GALALLEALA QAGIPCAVAS SSARDVIRAR
LDAVGVLPFF HAIAGGDEVA RGKPDPAVYR LAAERLGVPA HACVAFEDSD FGALSAAGAG
ASVVTVPDLK APTPEIVALS LHVLTSLDDA LALVPSWFGG LDTQQSA