Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2343 |
Symbol | |
ID | 6177934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2610472 |
End bp | 2611155 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641682117 |
Product | HAD family hydrolase |
Protein accession | YP_001809037 |
Protein GI | 172061385 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.187691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCT CCGCCGCGCT CTTCGACATG GACGGCCTGC TCGTCGATTC CGAGCGGACC ATCATGAACA CGTGGATCGA CGTGTCGACC GCGCACGGCG TCACGTTGAC CGAGATCGAC TACCTGCAGA TCGTCGGGCG CTCGTTCGCC GAAGGCCAGG TGATTCTCGC GCGGCTGATC GGCGACACCA ACACGTTCGA CGCCGTGCGC CTGCTCGTGC GCGAACAGCT CGCCGCGCCT GAACCGCATC CGAAGTTTCC GCTGAAAGCA GGCGCGCTTG CGCTCCTCGA GGCGCTTGCG CAGGCCGGCA TCCCGTGCGC GGTCGCGTCA TCGTCCGCGC GCGACGTGAT CCGTGCACGG CTCGACGCGG TCGGCGTGCT GCCGTTCTTC CACGCGATCG CGGGCGGCGA CGAAGTCGCG CGCGGCAAGC CCGATCCGGC CGTGTACCGG CTCGCGGCCG AGCGCCTCGG CGTGCCGGCG CACGCGTGCG TCGCGTTCGA GGACAGCGAC TTCGGCGCGC TGTCGGCCGC CGGCGCGGGC GCATCGGTCG TCACCGTGCC GGACCTGAAA GCGCCGACGC CCGAGATCGT CGCGCTGAGC CTGCACGTGC TCACGTCGCT CGACGATGCG CTCGCGCTCG TGCCGTCGTG GTTCGGCGGC CTCGACACGC AGCAATCCGC GTAA
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Protein sequence | MTFSAALFDM DGLLVDSERT IMNTWIDVST AHGVTLTEID YLQIVGRSFA EGQVILARLI GDTNTFDAVR LLVREQLAAP EPHPKFPLKA GALALLEALA QAGIPCAVAS SSARDVIRAR LDAVGVLPFF HAIAGGDEVA RGKPDPAVYR LAAERLGVPA HACVAFEDSD FGALSAAGAG ASVVTVPDLK APTPEIVALS LHVLTSLDDA LALVPSWFGG LDTQQSA
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