| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2340 |
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| Symbol | |
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| ID | 6176693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2605691 |
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| End bp | 2606404 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682114 |
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| Product | P pilus assembly protein chaperone PapD-like protein |
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| Protein accession | YP_001809034 |
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| Protein GI | 172061382 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.200473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATGGT TCCCGCGCGC ATTGGCCGCG CTGTGCGTCG TGTCGGCGTG CGCGGCCGCA
TCCGCCGCCA CGCTGCAGAT CACGCCCGTG ACGATCGAGC TGGCGCCGTC GGCGGCCGCC
GCGAGCATGA CGCTCAGCAA TCCTGGCGGA CAGCCGATCT ATGGCCAGGT CCGCACCTAT
CGCTGGACGC AGCAAAACGG CGACGACGTG ATGACGCCGA CCGACATGCT CGCCGCGTCG
CCGCCGCTGC TGCAGATCGG CGCGAACGCC GAGCAGCTGA TCCGGCTCGT GCGCACGGGC
CGCGGCGCGC CGCCCGCCGA AGAAAGCTAT CGCGTGCTGA TCGATGAACT GCCCGCACCC
GGCACGCCGG TCGCGAACGG CGTCACGATC CGGCTGCGCT ATTCCGTGCC CGTATTCGTC
GAGCCCGATG GCGCACCGGT GTCGCCAATA CTTGACTGGC GCGTCGAGCG TGACGGCGCG
GGCACACGGC TTGCGGTCGA CAACCACGGT GGACGGCGCG CGCAGATTTC CGCGGTTCGG
CTCATCGACG CGCGCGGCAC CGTGCATGAC GTCACGCGCG GCCTGCTCGG CTATGCGCTC
GCGGGCAGCA CGCGGCGCTG GCCGCTCAAG CTGGATGTGG GCCCGGCGAC GTTCGTCCGG
ATCCAGGCGA CCGTCAACGC GCAGCCGGTC GAAGCGCGGC TGACACCGCC CTGA
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| Protein sequence | MAWFPRALAA LCVVSACAAA SAATLQITPV TIELAPSAAA ASMTLSNPGG QPIYGQVRTY
RWTQQNGDDV MTPTDMLAAS PPLLQIGANA EQLIRLVRTG RGAPPAEESY RVLIDELPAP
GTPVANGVTI RLRYSVPVFV EPDGAPVSPI LDWRVERDGA GTRLAVDNHG GRRAQISAVR
LIDARGTVHD VTRGLLGYAL AGSTRRWPLK LDVGPATFVR IQATVNAQPV EARLTPP
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