| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2319 |
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| Symbol | |
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| ID | 6176527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2579216 |
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| End bp | 2580148 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641682094 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001809014 |
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| Protein GI | 172061362 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.253365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGA TGCATCCCGA TCTGCGCCGT CTCGACCTGA ACCTGCTGCT CGCGTTCGAC
GCGCTGTACC GCCACCGGTC GGTGGCGGCG GCCGCGCACG AACTGGCGAT GAGCCCGTCC
GCGCTGAGTC ACGCGCTCGC GCGGCTTCGC GACGCGATCG GCGACGCGCT GTTCGTGCGG
CTCGGCAACG AGATGCAGCC GACCGTGCGC GCCGACGACA TCGCCACCTG GGCCGGCGAC
GCGCTCGACA CGATGTCGAA GGGGCTCGCC CGCGCGCGCC GCTTCGATCC CGCGCAAAGC
GACCGCACGT TCGTATTCGC CGCGAGCGAC TACACGGCGT TCGCCGTGCT GCCGGCCTTG
CTCGCGCGCA TCGAGCGGGT CGCGCCGCGG CTGCGGATTC GCGTCGTCCA TTCCGAGCGC
AAGATTTCGG TCGACGAACT CGCGGCCGGC CGCATCGATT TCGCGCTCGG TTATCACGAG
GAGTCGGCCG CCGACTCGCC GGGCATCGAG GATTTCGACT GGTTCTCGGA CGACTACGTG
GTGATCGCGA GCGCCGCGCA TCCGGACATC CGCCGGCGGC TGACGCTGGA CCAGTATCTC
GCGGCACGCC ACGTGGTCGT CACGCCGTGG AACGAGTCGC GCGGCGTCGT CGACTACGTG
CTCGACCGGC TCGGCCTCGC ACGGCAGGTC GCCGTGCAGC TGCCGAGCGT GCTGGCCGCA
CCGTTCGCGA TCGCGGAATC GACGCTGCTG ATGACGGTGC CGAACCGCGC CGCGCAGGCG
CTGCGCCACG CGGCGCCGAT CCGCATCTTC CCCGCGCCGT TCGAGATCCC GCGCTACACG
GTGAAGGTCT ACTCGCACGC GAAGCACGCA CGCACCGATG CGCACCGATG GATCCGCGCG
CAATTGCTCG ATGCGCGACC GGCGCGGGGT TGA
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| Protein sequence | MNMMHPDLRR LDLNLLLAFD ALYRHRSVAA AAHELAMSPS ALSHALARLR DAIGDALFVR
LGNEMQPTVR ADDIATWAGD ALDTMSKGLA RARRFDPAQS DRTFVFAASD YTAFAVLPAL
LARIERVAPR LRIRVVHSER KISVDELAAG RIDFALGYHE ESAADSPGIE DFDWFSDDYV
VIASAAHPDI RRRLTLDQYL AARHVVVTPW NESRGVVDYV LDRLGLARQV AVQLPSVLAA
PFAIAESTLL MTVPNRAAQA LRHAAPIRIF PAPFEIPRYT VKVYSHAKHA RTDAHRWIRA
QLLDARPARG
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