| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2317 |
|---|
| Symbol | |
|---|
| ID | 6177418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2577750 |
|---|
| End bp | 2578529 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641682092 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001809012 |
|---|
| Protein GI | 172061360 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.431352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.687012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCC AGACTCAGAA GCTTTTCGTC GACGATCTGC ACAAGCGGTA CGGCGACAAC
GAGGTGCTCA AGGGCGTGTC GCTGAAGGCG AACTCGGGCG ACGTGATCAG CGTGATCGGC
TCGTCCGGTT CCGGCAAGAG CACGATGCTG CGCTGTATCA ACTTCCTCGA ACAGCCGAAC
GCGGGCCGCA TCGTCGTCGA CGGCGAGGAA GTGCGCACCA CCGCCGACAA GATGGGCGCG
CTGCGCGCGG CCGATTCGAA GCAGCTGCAA CGCGTGCGCA CCAAGCTGTC GATGGTGTTC
CAGCACTTCA ATCTCTGGTC GCACATGAAC GTGATCGAGA ACGTGATGGA AGCGCCCGTC
AACGTGCTCG GCATCCCGAA GAAGGAAGCC GAGGATCGCG CCCGCACGTA TCTCGAGAAG
GTCGGCCTCG CGCCGCGCGT CGAGAAGCAG TATCCGTCAC ACCTGTCGGG CGGCCAGCAG
CAGCGCGTCG CGATCGCGCG TGCACTCGCG ATGCATCCCG ACGTGATGCT GTTCGACGAA
CCGACGTCGG CGCTCGACCC GGAACTCGTC GGCGAAGTGC TGAAGGTGAT GCAGAAGCTC
GCCGAGGAAG GCCGCACGAT GATCGTCGTC ACGCACGAGA TGGGCTTCGC GCGCAACGTG
TCGAATCACG TGATGTTCCT GCACCAGGGG CGCGTCGAGG AAGAAGGCGT GCCGTCCGAG
GTGTTCGCGA ATCCGAAGAG CGAGCGCCTG CGCGGGTTTT TGTCGGGCAG CCTCAAGTAA
|
|---|
| Protein sequence | MNSQTQKLFV DDLHKRYGDN EVLKGVSLKA NSGDVISVIG SSGSGKSTML RCINFLEQPN
AGRIVVDGEE VRTTADKMGA LRAADSKQLQ RVRTKLSMVF QHFNLWSHMN VIENVMEAPV
NVLGIPKKEA EDRARTYLEK VGLAPRVEKQ YPSHLSGGQQ QRVAIARALA MHPDVMLFDE
PTSALDPELV GEVLKVMQKL AEEGRTMIVV THEMGFARNV SNHVMFLHQG RVEEEGVPSE
VFANPKSERL RGFLSGSLK
|
|---|
| |