Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2316 |
Symbol | |
ID | 6176104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2577018 |
End bp | 2577731 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641682091 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001809011 |
Protein GI | 172061359 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.247214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.687012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAAC TCATCCAAGA ATACTGGCGC AACTATCTCT ATACCGACGG CTTCCGGATC ACCGGCGTCG CGATCACGCT GTGGCTGCTC GTCGTGTCGA TCGGCCTCGG CTTCTGCCTG TCGGTGCCGC TCGCGGTGGC CCGCGTGTCG AAGAGGAAGT GGCTGTCGGG CGCCGTGTGG CTCTACACGT ACGTGTTCCG CGGCACGCCG CTCTACGTGC AGCTGCTGCT CTGCTACACC GGCCTCTACA GCCTGCAGTT CATACGCGGC ACGCCGCTGC TCGATTCGTT CTTCCGCGAC GGGATGCGCT GCACGCTGCT CGCGTTCACG CTGAACACCT GCGCGTACAC CACCGAGATC TTCGCGGGCG CGATCAAGGC GACCTCGTAC GGCGAGATCG AAGCCGCGCG CGCATACGGG ATGTCCACCT TCACGATGTA TCGCCGCGTG ATCCTGCCAT CCGCGCTGCG CCGCGCGCTG CCGCTATACA GCAACGAAGT GATCCTGATG CTGCACGCGA CCACCGTCGC GTTCACCGCG ACCGTGCCGG ACATCCTGAA GATCGCCCGC GACGTGAACT CGGCGACCTA CATGTCGTTT CACGCATTCG GCATCGCCGC GCTGCTCTAT CTCGTGATCT CGTTCATGCT CGTGTGGCTG TTCCGCCAGG CCGAGCGTCG CTGGCTCGCG TATCTGCGCC CGCAAGGCAA GTAA
|
Protein sequence | MIELIQEYWR NYLYTDGFRI TGVAITLWLL VVSIGLGFCL SVPLAVARVS KRKWLSGAVW LYTYVFRGTP LYVQLLLCYT GLYSLQFIRG TPLLDSFFRD GMRCTLLAFT LNTCAYTTEI FAGAIKATSY GEIEAARAYG MSTFTMYRRV ILPSALRRAL PLYSNEVILM LHATTVAFTA TVPDILKIAR DVNSATYMSF HAFGIAALLY LVISFMLVWL FRQAERRWLA YLRPQGK
|
| |