Gene BamMC406_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2316 
Symbol 
ID6176104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2577018 
End bp2577731 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID641682091 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001809011 
Protein GI172061359 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.247214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.687012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TCATCCAAGA ATACTGGCGC AACTATCTCT ATACCGACGG CTTCCGGATC 
ACCGGCGTCG CGATCACGCT GTGGCTGCTC GTCGTGTCGA TCGGCCTCGG CTTCTGCCTG
TCGGTGCCGC TCGCGGTGGC CCGCGTGTCG AAGAGGAAGT GGCTGTCGGG CGCCGTGTGG
CTCTACACGT ACGTGTTCCG CGGCACGCCG CTCTACGTGC AGCTGCTGCT CTGCTACACC
GGCCTCTACA GCCTGCAGTT CATACGCGGC ACGCCGCTGC TCGATTCGTT CTTCCGCGAC
GGGATGCGCT GCACGCTGCT CGCGTTCACG CTGAACACCT GCGCGTACAC CACCGAGATC
TTCGCGGGCG CGATCAAGGC GACCTCGTAC GGCGAGATCG AAGCCGCGCG CGCATACGGG
ATGTCCACCT TCACGATGTA TCGCCGCGTG ATCCTGCCAT CCGCGCTGCG CCGCGCGCTG
CCGCTATACA GCAACGAAGT GATCCTGATG CTGCACGCGA CCACCGTCGC GTTCACCGCG
ACCGTGCCGG ACATCCTGAA GATCGCCCGC GACGTGAACT CGGCGACCTA CATGTCGTTT
CACGCATTCG GCATCGCCGC GCTGCTCTAT CTCGTGATCT CGTTCATGCT CGTGTGGCTG
TTCCGCCAGG CCGAGCGTCG CTGGCTCGCG TATCTGCGCC CGCAAGGCAA GTAA
 
Protein sequence
MIELIQEYWR NYLYTDGFRI TGVAITLWLL VVSIGLGFCL SVPLAVARVS KRKWLSGAVW 
LYTYVFRGTP LYVQLLLCYT GLYSLQFIRG TPLLDSFFRD GMRCTLLAFT LNTCAYTTEI
FAGAIKATSY GEIEAARAYG MSTFTMYRRV ILPSALRRAL PLYSNEVILM LHATTVAFTA
TVPDILKIAR DVNSATYMSF HAFGIAALLY LVISFMLVWL FRQAERRWLA YLRPQGK