Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2315 |
Symbol | |
ID | 6176911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2576332 |
End bp | 2577021 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641682090 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001809010 |
Protein GI | 172061358 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.934444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.871758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTAC AAGGTTACGG CCCGCTGATC CTCGCAGGCA CCTGGCAAAC CGTCAAACTG GCGGTGCTGT CGCTCGCGTT GTCGTTCCTG CTGGGCCTGC TCGGCGCGGG CGCGAAGCTG TCGCGCAACC GCGTGACGAA CGGCATCGGC ACCGTCTACA CGACGCTGAT CCGCGGCGTA CCCGACCTCG TGCTGATGCT GCTGCTGTTC TACAGCCTGC AGATCTGGTT GAACTCCGCG ACCGACGCGC TCGGCTGGGA CCAGATCGAC ATCGACCCGT TCCTCGCCGG CGTGCTCGTG CTCGGCTTCA TCTACGGCGC GTACTTCACC GAGACCTTCC GCGGCGCGTT CCTGTCGGTG CCGCGCGGCC AGCTCGAGGC CGGCAGCGCG TACGGGATGA CCAGCTGGCA GGTGTTCGCG CGGATCATGT TCCCGCAGAT GATGCGCTTC GCGCTGCCCG GCATCGGCAA CAACTGGCAG GTGCTCGTGA AGTCGACCGC GCTGGTGTCG ATCATCGGCC TCGCGGACGT CGTCAAGGCG TCGCAGGATG CCGGCAAGGG CACGCTGCGG TTCTTCTTCT TCACGTTGAT CGCCGGTGCG GTCTACCTCG CCATCACGAC GATCTCGAAC TTCGTGCTGA TGTGGCTCGA AAAGCGCTAC TCGACCGGTG TCCGCAAGGC TGACCTATGA
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Protein sequence | MFLQGYGPLI LAGTWQTVKL AVLSLALSFL LGLLGAGAKL SRNRVTNGIG TVYTTLIRGV PDLVLMLLLF YSLQIWLNSA TDALGWDQID IDPFLAGVLV LGFIYGAYFT ETFRGAFLSV PRGQLEAGSA YGMTSWQVFA RIMFPQMMRF ALPGIGNNWQ VLVKSTALVS IIGLADVVKA SQDAGKGTLR FFFFTLIAGA VYLAITTISN FVLMWLEKRY STGVRKADL
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