Gene BamMC406_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2306 
Symbol 
ID6178055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2567478 
End bp2568815 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content66% 
IMG OID641682081 
ProductABC transporter related 
Protein accessionYP_001809001 
Protein GI172061349 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.72885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.89546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAATC CGAATGCTGT AAACGCCCCC GTCCAGACGT CCCAGCCGCC GCGCCTCGGC 
GAGGAAATCC TGCGTGTCGA TCACGTCTGT CGCGGCTTCA ACAAGACGCA GGGTGAATTG
CTCGTGCTCG ACGACGCGAA CCTGTCGCTG CGCGAAGGCG AGATCGTCGG GCTGCTCGGC
CGTTCCGGGT CGGGCAAGTC GACGCTGCTG CGGATCATCG CCGGGCTGAT CGAGCCGACA
GGCGGTGAAG TGACCTATCT CGGCAAGCCG CTGCGCGGGC CGGCCGAAGG CGTCGCGATG
GTGTTCCAGA CCTTCGCGCT GTTCCCGTGG CTGACCGTGT TGCAGAACGT GGAAGCCGGG
CTGGAAGCGC TGGGCGTCGG CGCACGCGAG CGGCGCGAAC GCGCGCTCGC CGCGATCGAC
CTGATCGGTC TCGACGGTTT CGAGAACGCG TATCCGCGCG AGTTGTCGGG CGGCATGCGC
CAGCGCGTGG GCTTCGCGCG CGCGCTCGTC GTCGATCCGA CGATCCTGCT GATGGACGAG
CCGTTCTCCG CACTCGACGT GCTGACGGCC GAAACGCTGC GTACCGACCT GCTGGACCTG
TGGACGCAAG GCCGGATGCC GATCAAGTCG GTGCTGATCG TCACGCACAA CATCGAGGAA
GCGGTGTTCA TGTGCGACCG GATCCTGGTG CTGTCGTCCA ACCCGGGCCG CGTGATCGCC
GAGATCAAGG TGCCGTTCAA GCATCCGCGC AACCGGCTCG ATCCGGCCTT CCGCAAGCTG
GTCGACGACA TCTACGCAAA GATGACCGCG CGCCAGACCG GCGAAGCGAC GAAGAAGGGG
CTGGAGCTCG GCAGCTGGCT GCCGCAGGTG TCGACCAACC TGATGGCCGG CCTGATCGAG
ACGCTCGCGA TGGCGCCGTA CCACGGCCGC GCGGACATGC CGGAAATCGC GCGCACGCTG
CATCTGGAAG TGGACGACCT GTTCCCGATC GCCGAAGTGC TGCAGTACCT CGGTTTTGCC
GACGTGCGGG AAGGCGACGT GTTCCTCACG CCGCCGGGGC GCGTGTTCGC GGAGTTCGGC
ACGCAGGAGC GCAAGCTGAT GTTCGCGGAT CACCTGCTCA AGCACGTTCC GCTCGCCGCG
CGGATCAAGA AGGTGCTGAA CGAGCGCCCG GGCCATCGCG CGCCGCGCGT GCGCTTCGAG
CAGGAGCTGG AGGATTTTCT GTCGGATGGC GCGGCCGAGG AAACGCTCGA CGCGGTGATC
GACTGGGGCC GTTACGGCGA GATCTTCTCG TACAACGACC AGACCGAAAT CTTCAGCCTC
GAGGACGTCG AGTCGTAA
 
Protein sequence
MHNPNAVNAP VQTSQPPRLG EEILRVDHVC RGFNKTQGEL LVLDDANLSL REGEIVGLLG 
RSGSGKSTLL RIIAGLIEPT GGEVTYLGKP LRGPAEGVAM VFQTFALFPW LTVLQNVEAG
LEALGVGARE RRERALAAID LIGLDGFENA YPRELSGGMR QRVGFARALV VDPTILLMDE
PFSALDVLTA ETLRTDLLDL WTQGRMPIKS VLIVTHNIEE AVFMCDRILV LSSNPGRVIA
EIKVPFKHPR NRLDPAFRKL VDDIYAKMTA RQTGEATKKG LELGSWLPQV STNLMAGLIE
TLAMAPYHGR ADMPEIARTL HLEVDDLFPI AEVLQYLGFA DVREGDVFLT PPGRVFAEFG
TQERKLMFAD HLLKHVPLAA RIKKVLNERP GHRAPRVRFE QELEDFLSDG AAEETLDAVI
DWGRYGEIFS YNDQTEIFSL EDVES