| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2277 |
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| Symbol | |
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| ID | 6176548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2535493 |
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| End bp | 2537814 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682050 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001808972 |
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| Protein GI | 172061320 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACA ATACTTCCGA TCTCTTCGCC GGGTCCGACG CACCGGACGC CGATGCGCTG
ACGCTCGGCA ATTACGCGGA GCAGGCGTAC CTCAGCTACG CGGTCAGCGT CGTGAAGAGC
CGCGCGCTGC CCGACGTGTG CGACGGCCAG AAGCCGGTGC AGCGCCGGAT CCTGTTCGCG
ATGAACGAAA TGGGCCTCGG CCCCGACGCG AAGCCGGTGA AGTCGGCGCG CGTGGTCGGC
GACGTGCTCG GTAAATACCA CCCGCATGGC GACCAGTCGG CGTACGACGC GCTCGTGCGT
CTCGCGCAGG ATTTCTCGCT GCGCTATCCG CTGATCGACG GGCAGGGCAA CTTCGGCTCG
CGCGACGGCG ACGGCGCGGC GGCGATGCGA TACACCGAAG CGCGGCTCAC GCCGATCTCG
AAGCTGCTGC TCGACGAGAT CGACCAGGGC ACGGTCGACT TCATGCCGAA CTACGACGGC
TCGTTCGAGG AACCGAAGAC GCTGCCGAGC CGCATGCCGT TCGTGCTGCT GAACGGCGCA
TCGGGCATCG CGGTCGGCCT CGCCACCGAA ATCCCGTCGC ACAACCTGCG CGAGGTCGCG
GCGGCGGCGG TCGCATTGAT CCGCAATCCG AAGCTCACGC ACGCGGAGCT GATGAACCTG
ATTCCCGGCC CGGACTTCCC GGGCGGCGGC CAGATCATCT CGAGCGACAC CGAGATCGCG
GCGGCCTATG AAACCGGCCG CGGCAGCCTG AAGGTGCGCG CGCGCTGGAA GATCGAGGAT
CTCGCGCGCG GCCAGTGGCA ACTCGTCGTC ACCGAGCTGC CGCCGAGCAC GTCGGGCCAG
AAGGTGCTCG AGGAAATCGA AGAGCTGACC AACCCGAAGC TCAAGCTCGG CAAGAAGACG
CTCACGCCCG AACAGCTCAA CACGAAGAAG GCGATGCTCG ACCTGCTCGA CGCGGTGCGC
GACGAGTCGG GCAAGGAAGC GGCGGTGCGG CTCGTGTTCG AGCCGAAGTC GCGCACGATC
GATCAGACTG AATTCGTGAA CACGCTGCTC GCATACACGA GCCTCGAGTC GAACGCGACG
CTGAACCTCG TGATGATCGG CGCCGACGGT CGGCCGGGCC AGAAGGGGCT GCTGACGATC
CTCGACGAAT GGGTGAAGTT CCGCCAGCTG ACGATGACGC GCCGGTGCCG CCATCGTCTC
GCGAAGGTCG ACGATCGCAT CCACATCCTC GAAGGGCGGA TGATCGTCTT CCTGAACATC
GACGAGGTGA TCCGCATCAT CCGCGAGGCG GACGAGCCGA AGGCCGCGCT GATGAGCGCG
TTCGGCCTCA CCGACCGCCA GGCGGAAGAC ATCCTCGAAA TCCGGCTGCG TCAGCTCGCG
CGGCTCGAGA AGATCAAGAT CGAGAAGGAA CTCGAGACGC TGCGCGACGA GAAGGCGAAG
CTCGAGGAGC TGCTCGCGAA CGAAAGCGCG ATGAAGCGGC TGATGATCAA GGAGATCGAG
ACCGACGCGA AGCAGTACGG CGACGATCGC CGCACGCTGA TCCAGCAGGA AAAGCGCGCG
ACGTTCGAAG CGAAGGTGGT GGACGAGCCG GTGACGGTCG TTGTGTCGCA GAAGGGCTGG
GTGCGCGCGC TGAAGGGTCA CGGGCTCGAC CCGGCCGGCT TCACGTTCAA GGCGGGTGAC
CACCTGTACG CGGCGTTCCA GTGCCGCACG CCCGACCGCC TGATCGCGTG GGGCAGCAGC
GGCCGCGTGT ACTCGGTCGA CGTGTCGGTG CTGCCGGGCG GCCGCGGCGA CGGTGTGCCG
GTGACGTCGC TGATCGAGCT CGAATCGGGC TCGCACCTGA TGCACTACTT CGCGGCGCCG
GTCGACCAGC AACTGCTGCT CGCATCGAGC AATGGGTTTG GCTTCCTCGC GAAGGTCGGC
GACATGGTGA GCCGCGTGAA GGCCGGCAAG GCGTTCATGA CTATCGATAC GGGCGCGGTG
CCGCTCGCGC CGATGCCGGT GCTGCCGAAC GCGACGCAGG TCGCGTGCCT GTCGAGCGGC
GGCCGGCTGC TGGTGTTCGG GATGGACGAG ATGAAGACGC TGTCCGGCGG CGGCCGCGGC
GTGATCCTGA TGGCGCTCGA CGACAAGGAA ACGCTCGTGC AGGCGCTCGC GATCGACCCG
GCCGGCGTCG TGCTGATCGG CACCGGTCGC GGCGGCAAGG CGCAGGACGA GACGCTGTCG
TACGCGGGGC TCGCGCCGCA CATCGGCAAG CGCGCACGCA AGGGCCGCAC GCCGGAGACG
AAGCTCAAGG TCGTCAACGA ACTGCGTCCG CTGCTCGGCT GA
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| Protein sequence | MDDNTSDLFA GSDAPDADAL TLGNYAEQAY LSYAVSVVKS RALPDVCDGQ KPVQRRILFA
MNEMGLGPDA KPVKSARVVG DVLGKYHPHG DQSAYDALVR LAQDFSLRYP LIDGQGNFGS
RDGDGAAAMR YTEARLTPIS KLLLDEIDQG TVDFMPNYDG SFEEPKTLPS RMPFVLLNGA
SGIAVGLATE IPSHNLREVA AAAVALIRNP KLTHAELMNL IPGPDFPGGG QIISSDTEIA
AAYETGRGSL KVRARWKIED LARGQWQLVV TELPPSTSGQ KVLEEIEELT NPKLKLGKKT
LTPEQLNTKK AMLDLLDAVR DESGKEAAVR LVFEPKSRTI DQTEFVNTLL AYTSLESNAT
LNLVMIGADG RPGQKGLLTI LDEWVKFRQL TMTRRCRHRL AKVDDRIHIL EGRMIVFLNI
DEVIRIIREA DEPKAALMSA FGLTDRQAED ILEIRLRQLA RLEKIKIEKE LETLRDEKAK
LEELLANESA MKRLMIKEIE TDAKQYGDDR RTLIQQEKRA TFEAKVVDEP VTVVVSQKGW
VRALKGHGLD PAGFTFKAGD HLYAAFQCRT PDRLIAWGSS GRVYSVDVSV LPGGRGDGVP
VTSLIELESG SHLMHYFAAP VDQQLLLASS NGFGFLAKVG DMVSRVKAGK AFMTIDTGAV
PLAPMPVLPN ATQVACLSSG GRLLVFGMDE MKTLSGGGRG VILMALDDKE TLVQALAIDP
AGVVLIGTGR GGKAQDETLS YAGLAPHIGK RARKGRTPET KLKVVNELRP LLG
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