| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2258 |
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| Symbol | |
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| ID | 6177427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2517476 |
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| End bp | 2518393 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682031 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001808953 |
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| Protein GI | 172061301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.151852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAC TCATCAAGCG CGCGTCCGCC GAGGCGCGCG CGTTCAAGCA ACGCAAGGCG
TCCGCCTACA ACGGCTCCGA CAAGCTCCAG CCGCCGCGCA TGAAGCGCCG CCCGGAAATC
GACGAACACG ACGACGTGCC CGTGCTCGAA GCGCCGCGCA AGCCGCGCTT CGCGCCCGTC
ACGTTCTCGG AAGAGCGCGG CGTGCGCTTC CTGCACTTCG GCACCGAATG GGTGCAGGGC
GCGATGCGGA TCTCGAAGCC GCTGCACATC GAGCTCGAAT ACGCACAGCA GATGATGGCA
TGGCTGCTGT TCCTCGAAAC GCCCGAACGG ATCGTCCAGC TCGGGCTCGG CACCGGCGCG
CTGACCAAGT TCTCGCACCG CTTCCTGCCG CACGCGAAGG TCGAGGCCGT CGAACTGAAC
CCGGCCGTGA TCGTCGCGGC GCGCACGATG TTCGCGCTGC CGCCCGACGA CGAACGCCTC
GTCGTGCACG AAGCCGACGC ATGGGACTTC GTCAACGATC CGGCCAACCG CGGCACGACG
GGCGCGCTGC AGATCGACCT GTACGACGCG ACCGCGCGCG GCCCGGTGCT CGACAGCGTC
GCGTTCTACC GCGCGGTGCG CGGCTGCCTC GCCGATGCGG GCATCGCGAC GATCAACCTG
TTCGGCGACC ATCCGAGCTT CGTGCGCAAC ATGAAGCACC TGAACGCGGC GTTCGACCAT
CGCGTGATCG CGCTGCCGGA AGTGCACGAC GGCAACCGCA TCGCGATCGC GTTCTCGGGC
CCCGTGCTCG ACGTGTCGTT CGCGCAGCTG GAGGCACGCG CGAAGCTCAT CGAGGATACG
CTGAAGCTGC CCGCGCGCAA ATGGGTGAAA GCTTTGAAAG AAACGACCGG CGCACGCGAA
TCCTCGTTCG CGATCTGA
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| Protein sequence | MSRLIKRASA EARAFKQRKA SAYNGSDKLQ PPRMKRRPEI DEHDDVPVLE APRKPRFAPV
TFSEERGVRF LHFGTEWVQG AMRISKPLHI ELEYAQQMMA WLLFLETPER IVQLGLGTGA
LTKFSHRFLP HAKVEAVELN PAVIVAARTM FALPPDDERL VVHEADAWDF VNDPANRGTT
GALQIDLYDA TARGPVLDSV AFYRAVRGCL ADAGIATINL FGDHPSFVRN MKHLNAAFDH
RVIALPEVHD GNRIAIAFSG PVLDVSFAQL EARAKLIEDT LKLPARKWVK ALKETTGARE
SSFAI
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