Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2256 |
Symbol | |
ID | 6176409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2515488 |
End bp | 2517038 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641682029 |
Product | Na+/solute symporter |
Protein accession | YP_001808951 |
Protein GI | 172061299 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0904619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCG GCGCAACCTT CGTCTTCGTG CTGCTGTTCA TCGGCGTCAC GATCATCGGT TTCCTGGCCG CGAACTGGCG GCGCGGCGAT CTCGCCCATC TCGACGAATG GGGCCTGGGC GGCCGCCGCT TCGGCACGAT CGTCACGTGG TTCCTGCTCG GCGGCGACCT CTACACGGCC TATACGTTCG TCGCGGTGCC CGCGCTGGTG TTCGGCGCCG GTGCGATGGG CTTCTTCGCG CTGCCCTACA CGATCCTGAT CTATCCGTTC GCGTTCGTCG TCTTCCCGAA GCTGTGGAGC ATCGCGAAGC GCCACGGCTA CGTGACGGCC GCCGACTTCG TGAACGCACG CTACGGCAGC CGCATGCTCG CGCTCGCGAT CGCGGTGACG GGCATCCTCG CGACGATGCC GTACATCGCG CTGCAGCTCG TCGGCATCGA AGTCGTGATC GGCGCGCTCG GTTTCGACAC GACCGGCTTC GTCGGCGACC TGCCGCTGAT CATCGCGTTC GCGATCCTCG CCGCGTACAC GTACACGTCG GGGTTGCGCG CGCCCGCGAT GATCGCGATC GTGAAGGACG TCCTGATCTA CATCACGATC GCGGCAGCAG TCATCGTGAT CCCCGCGAAG CTCGGCGGCT TCGGACACAT CTTCGCGTCG GTGCCGCCGG CCAAGCTGCT GCTGAAGGCC CCTGACGCGA CGAGCCTGAA CGGCTACAGC GCGTACGCGA CGCTCGCGAT CGGTTCCGCG CTCGCACTGT TCCTGTATCC GCACTCGGTC ACGGCGATCC TGTCGTCGTC GTCGGGCAAC TCGATCCGCC GCAACATGGC GATGCTGCCC GCGTACTCGT TCGTGCTCGG CCTGCTCGCG CTGCTCGGCT ACATGGCGCT CGCGGCGGGC GTGAAGGACA TGCCGCAGTA CGCGCCGTAC TTCAAGGCGT TCGGCCCGAA CTTCGCGGTG CCCGCGCTGT TCCTCGAGTA TTTTCCGTCG TGGTTCGTCG GCGTCGCGTT CGCGGCGATC GGCATCGGCG CGCTGGTGCC GGCGGCGATC ATGTCGATCG CGGCCTCGAA CCTGTACACG CGCAACATCC ACCGCGAGTT CGTGAACCGC AACATGACGC ACGCGCAGGA GACGCACGTC GCGAAGCTCG TGTCGCTGAT CGTGAAGGTC GGTGCGGTCG CGTTCATCCT CGGCTTGCCG CTGACGTATG CGATCCAGCT GCAGCTGCTC GGCGGGATCT GGATCATCCA GACGCTGCCG GCGATCGTGC TCGGCCTGTA CACGCGCATG CTCGACCATC GCGGCCTGCT GGCCGGCTGG GCGGCAGGCA TCGTGTGCGG CACGTGGATG GCGATCTCGC TGAAGCTGGC CGGATCGATC TTCACGATCC ATCTGTTCGG TCTCGCGATT CCCGGCTACG CGGCCGTGTG GTCGCTGATC GTGAACCTGG TGGTGTCGGT GGCGGTGAGC GTGCTGGTGC GCGTGATGGG CATGGCGCAT GCGGAGGACC GCACGCGGCC GGAGGATTAT CTCGACGTGG TCGAGAGCTG A
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Protein sequence | MNLGATFVFV LLFIGVTIIG FLAANWRRGD LAHLDEWGLG GRRFGTIVTW FLLGGDLYTA YTFVAVPALV FGAGAMGFFA LPYTILIYPF AFVVFPKLWS IAKRHGYVTA ADFVNARYGS RMLALAIAVT GILATMPYIA LQLVGIEVVI GALGFDTTGF VGDLPLIIAF AILAAYTYTS GLRAPAMIAI VKDVLIYITI AAAVIVIPAK LGGFGHIFAS VPPAKLLLKA PDATSLNGYS AYATLAIGSA LALFLYPHSV TAILSSSSGN SIRRNMAMLP AYSFVLGLLA LLGYMALAAG VKDMPQYAPY FKAFGPNFAV PALFLEYFPS WFVGVAFAAI GIGALVPAAI MSIAASNLYT RNIHREFVNR NMTHAQETHV AKLVSLIVKV GAVAFILGLP LTYAIQLQLL GGIWIIQTLP AIVLGLYTRM LDHRGLLAGW AAGIVCGTWM AISLKLAGSI FTIHLFGLAI PGYAAVWSLI VNLVVSVAVS VLVRVMGMAH AEDRTRPEDY LDVVES
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