| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2247 |
|---|
| Symbol | |
|---|
| ID | 6177184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2507563 |
|---|
| End bp | 2508492 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641682020 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001808942 |
|---|
| Protein GI | 172061290 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.654485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA CCGCCCGCTC ATCGTCCCCC GCGCTGCAGG GCGCGCTCTA TGTCGCGCTG
TCCGCCGCCG CATTCGGCGC GATGGCGATC TTCGGCCGCT ATGCGTATGC GGCCGGCGTC
GACGTGCTCG GGCTGCTGAT CGTGCGCTTC GCGATCGGCG GCGCGATCCT CGCCGCGATC
GCCCGGCACC GCCGCGTCGC ATGGCCGCGC GGCCGCACGC TCGTGCCGCT CGTGGCGATG
GGCGCGCTCG GCTACGTCGG ACAGTCGTTC TGCTATTTCA GCGCGCTCCA ACATGCGCAG
GCGAGCCTCG TCGCCTTGCT GCTGTACCTG TATCCGGCCT TCGTCACGCT GCTCGCCGCG
TGGTGGCTCG GCGAGCGCCT GACGCGCGCG AAGGCGGTCG CGCTCGTGCT CTGTGTCGCG
GGCTCCGCGC TGATGGTCGG CGGCGGCCAC GGCGAGCCGC TCGGTATCGC GCTCGCGCTG
GCGTCCGCGG TGATCTATTC GCTGTACATC GTCGGCGGCA CGAAGGCGAC GCGCGGCGTC
GATCCGCTCG CGACCACCGC GATCATCTGC CTGTCGGCGA CCGCGACGCT CGTCGCGATC
GCGATCGTGC GGACCGCGGC GTTCGGCGCG CCGCCGCGCT GGCCGGCGAC CACCGCCGGC
TGGGCGTCGA TGCTCGCGAT CGCGCTGGTG TCGACGGTCG CCGCGATGCT CGCGTTCTTC
GCCGGGCTCG AGCGGCTGGG CGCTGCGCGT ACGTCGATGC TGTCGACGCT CGAACCGGTC
GTGACGGTCG CGCTCGCGGC GCTGCTGTTC GGCGAGGCGC TGTCGCCGCT GCAGTGGGCC
GGCGGCGTCG CGATCCTCGC GGCCGTGCTG GCGCTCGTGC GCGCGGGCGG CGCGGCGGCC
GACGACGCGA CGGCGACGTC CAACGCATAG
|
|---|
| Protein sequence | MSATARSSSP ALQGALYVAL SAAAFGAMAI FGRYAYAAGV DVLGLLIVRF AIGGAILAAI
ARHRRVAWPR GRTLVPLVAM GALGYVGQSF CYFSALQHAQ ASLVALLLYL YPAFVTLLAA
WWLGERLTRA KAVALVLCVA GSALMVGGGH GEPLGIALAL ASAVIYSLYI VGGTKATRGV
DPLATTAIIC LSATATLVAI AIVRTAAFGA PPRWPATTAG WASMLAIALV STVAAMLAFF
AGLERLGAAR TSMLSTLEPV VTVALAALLF GEALSPLQWA GGVAILAAVL ALVRAGGAAA
DDATATSNA
|
|---|
| |