Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2235 |
Symbol | |
ID | 6177743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2490225 |
End bp | 2491760 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682008 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001808930 |
Protein GI | 172061278 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAG GCCCGGCGGG CCTGACGCAC GATGTCCCCG CCGCGCCTTT TGAGCGAAAC GCCACCATGT CCGATTCTGT CGCCAAGCCA GTCGACGCAA CCTTCGATCA ATTCGGCCTT GCCGCCGATA TCCTGAAAGC CATTGCGGAG CAGGGTTATA CGACGCCGAC GCCGATCCAG GCGCAGGCCA TTCCCGTCGT GCTCGCCGGG CGCGACGTCA TGGGCGCCGC GCAAACGGGT ACCGGCAAGA CCGCGAGCTT CTCGCTGCCG ATCATCCAGC GGCTGCTGCC GCAGGCCAGC ACGAGCGCGT CCCCCGCGCG CCACCCCGTG CGCGCGCTGA TCCTCACGCC GACCCGCGAA CTCGCCGACC AGGTCGCCGC GAACGTGCAC GCGTATGCGA AGCACACGTC GCTGCGCAGC GCGGTCGTGT TCGGCGGCGT CGACATGAAT CCGCAGATGG CCGAGCTGCG CCGCGGCGTC GAGATCCTGA TCGCGACGCC GGGCCGCCTG CTCGACCACG TGCAGCAAAA GACGGCGAAC CTCGGTCAGG TCCAGATCCT CGTGCTCGAC GAAGCCGACC GGATGCTCGA CATGGGCTTC CTGCCCGACC TGCAGCGCAT CCTGAACCTG CTGCCGAAGG AACGCCAGAC GCTGCTGTTC TCGGCCACCT TCTCGCCCGA AATCAAGAAG CTCGCATCGA CCTACCTGCG CAACCCGCAG ACGATCGAGG TCGCGCGCAG CAACTCGACC AACGCGAACG TCACGCAGAT CGTCTACGAC GTCGCCGAAG GCGACAAGCA CGGAGCCGTC GTGCAGCTGT TGCGCGATCG CGGGCTCAAG CAGGTGCTCG TGTTCTGCAA CAGCAAGATC GGCGCGAGCC GGCTGGCGCG CAATCTCGAG CGTGACGGCG TGGTCGCGTC GGCGATCCAC GGCGACAAGT CGCAGCTCGA GCGGATGCAG GCGCTCGACG CGTTCAAGCG CGGCGAGATC GAGGCGCTGG TCGCGACCGA CGTGGCCGCG CGCGGTCTCG ACATCGCCGA ACTGCCGGCC GTGATCAACT TCGACCTGCC GTTCAACGCG GAAGACTACG TGCACCGGAT CGGCCGCACG GGCCGCGCGG GCGCGACGGG CGACGCGCTG TCGCTGTGCA GCCCGAACGA GCGCAAGCAG CTGGCCGATA TCGAAAAGCT GATCAAGCGT CCGCTCGAGG TGCAGACGCT CGCGCTCGAC AAGCCGTCGC GTCATCGTCA CGACGAGCGC GGCGGCGAAC GCGGCGGTGA ACGCGGCGGC CGACGCGAGC GCGACGAGCA TCGCGGTGCG TCGGCGCGTC GTTCGGGTAG CTCCGAGCGT GGGGGTCATC ATCGTCGCCA CGAGGCGCCG GTCGACGATT TCTTCCTGAA GCCGTACGAA CCGTCGGTGC CGGCGACGCA GCCGGAAGAG ACGCAGTCCG CGCAGCAGCA CGAGAAGAAG GGGCCGAAGC GTCAGGTCGC CGCGCTGCTC GGCGGCTTCG GGATGCCGCG CAAGCCGTCG GCGTAA
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Protein sequence | MSAGPAGLTH DVPAAPFERN ATMSDSVAKP VDATFDQFGL AADILKAIAE QGYTTPTPIQ AQAIPVVLAG RDVMGAAQTG TGKTASFSLP IIQRLLPQAS TSASPARHPV RALILTPTRE LADQVAANVH AYAKHTSLRS AVVFGGVDMN PQMAELRRGV EILIATPGRL LDHVQQKTAN LGQVQILVLD EADRMLDMGF LPDLQRILNL LPKERQTLLF SATFSPEIKK LASTYLRNPQ TIEVARSNST NANVTQIVYD VAEGDKHGAV VQLLRDRGLK QVLVFCNSKI GASRLARNLE RDGVVASAIH GDKSQLERMQ ALDAFKRGEI EALVATDVAA RGLDIAELPA VINFDLPFNA EDYVHRIGRT GRAGATGDAL SLCSPNERKQ LADIEKLIKR PLEVQTLALD KPSRHRHDER GGERGGERGG RRERDEHRGA SARRSGSSER GGHHRRHEAP VDDFFLKPYE PSVPATQPEE TQSAQQHEKK GPKRQVAALL GGFGMPRKPS A
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