| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2232 |
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| Symbol | dnaE |
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| ID | 6177719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2484629 |
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| End bp | 2488201 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682005 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001808927 |
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| Protein GI | 172061275 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCAGCC TGCGCGACGA CGCGGCTACA ATAACGCCCA TGTCAGATCC CCGCTTCGTC
CATCTTCGCG TTCACTCCGA ATTCTCGATT GCCGACGGCA TCGTGCGTCT CGACGACATC
GTCAAGGCGG CGGCCGCGGA CGGCCAGGGC GCGCTCGCCC TCACCGATCT CGGCAACGCA
TTCGGCCTCG TCCGTTTCTA CCAGGAAGCC CGCGGCAAGG GCATCAAGCC GATCGCCGGC
TGCGACGTCT GGATCACCAA TCCGGACGAT CGCGACAAAC CGTCGCGCCT GCTGCTGCTG
GTGAAGGACA AGGTCGGCTA CCTGAACCTG TGCGAGCTGC TGTCGAAGGC ATGGCTCACG
AACCAGTACC GCGGCCGCGC GGAGCTCGAC GCGAGCTGGC TCGACGGCGA ACTGTCGCAA
GGGCTGCTCG CGCTGTCGGG CGCGCAGCAG GGCGATATCG GGCTCGCGTT CGCGGCCGGC
AACGAGGAAG CCGCGCGCCG TCATGCCGAG CGCTGGGCGA AGGTGTTCCC GGGCGGCTTC
TACATCGAGC TGCAGCGTTA CGGCCAGCCG GGCGCCGAGG CGTACATCCA GCAGGCCGCG
ACGCTCGCCG CGTCGCTCGG TCTGCCGGTC GTCGCGACGC ATCCGACGCA GTTCATGACC
GACGATGATT TCACCGCGCA CGAAGCGCGC GTGTGCATCT CGGAAGGCGA CATGCTCGCG
AATCCGCGGC GCCAGAAACG CTTCACGACC GATCAGTACT TCCGCACGCA GGACGAGATG
GTCGCGCTGT TCGCCGATCT TCCCTCGGCG GTCGCGAACA CGGTCGAGAT CGCGAAGCGC
TGCAACCTGA AGCTCGAGCT CGGCAAGCCG AAGCTGCCGC TGTTCCCGAC GCCGGACGGC
ATGTCGCTCG ACGACTACCT GGTCCAACTG TCGAAGGAAG GGCTCGAGAA GCGCCTCGAA
CAGCTGTTTC CGGATACGGC CGAGCGTGAC GCGCAGCGCG ACACGTACTA CAAGCGGCTC
GAATTCGAGT GCGGGACCAT CACGAAGATG GGCTTCCCGG GCTACTTCCT GATCGTTGCC
GACTTCATCA ACTGGGCGAA GAACAACGGC GTGCCGGTCG GCCCGGGCCG CGGCTCGGGC
GCCGGCTCGC TGGTCGCGTA CGCGCTCGGC ATCACCGATC TGGATCCGCT GCGCTACAAC
CTGCTGTTCG AGCGATTCCT GAATCCGGAA CGCGTGTCGA TGCCCGACTT CGACATCGAC
TTCTGCCAGC ACGGCCGCGA TCGCGTGATC CAGTACGTGA AGGAAAAATA TGGCGCGGAC
GCCGTGTCGC AGATCGCCAC CTTCGGCACG ATGGCCGCGA AGGCGGCCGT GCGCGACATC
GGCCGCGTGC TCGATCTCGG CTACATGTTC ACCGACGGCG TCGCGAAGCT GATCCCGTTC
AAGCCGGGCA AGCACGTGAC GATCGCCGAC GCGATGAAGG AAGAGCCGCA ACTGCAGGAG
CGCTACGACC ACGAGGACGA AGTGCACCAG CTGCTCGACC TCGCGCAGCG CGTCGAGGGC
CTGACGCGTA ACGTCGGGAT GCACGCGGGC GGCGTGCTGA TCGCGCCCGG CAAGCTGACC
GATTTCTGCC CGCTGTACAC GCAGGGCGAC GACGGCGGCG TCGTCAGCCA GTACGACAAG
GACGACGTCG AAGCCGTCGG CCTCGTGAAG TTCGACTTTC TGGGTCTCAC GACGCTGACG
ATCCTCGACT GGGCCGAGCG CTACATCCGC CGCCTCGATG CGTCGAAGGC CGACTGGTCG
CTCGCGCAGG TGCCGCTCGA CGATCCTGCA TCGTTCCAGA TCCTGAAGAA GGCCAACACG
GTCGCCGTGT TCCAGCTGGA AAGCCGCGGG ATGCAGGGCA TGCTGAAGGA CGCGCAGCCC
GACCGCTTCG AGGACATCAT CGCGCTCGTG TCGTTGTACC GTCCGGGCCC GATGGACCTG
ATCCCGAGCT TTTGCGCACG TAAGCACGGC CGCGAGAAGG TCGAGTATCC GGATCCGCGC
GTCGAACCCG TCCTGAAAGA GACCTACGGC ATCATGGTCT ATCAGGAGCA GGTGATGCAG
ATGGCGCAGA TCATCGGCGG CTATTCGCTC GGCGGCGCCG ACTTGCTGCG TCGCGCGATG
GGCAAGAAGA AGCCCGAGGA GATGGTCAAG CACCGCGAGA TCTTCGCCGA GGGTGCGGCG
AAGAACGGCC TCACGCGCGA GAAGTCCGAC GAGATCTTCG ACTTGATGGA GAAGTTCGCG
GGCTACGGCT TCAACAAGTC GCACGCGGCG GCCTATGCAT TGCTCGCGTA TTACACCGCG
TGGCTGAAGG CGCACCATCC GGCCGAATTC ATGGCGGCCA ACATGACGCT CGCGATGGAC
GACACCGACA AGGTGAAGAT CCTGTTCGAC GATTGCGTCG TGAACAACCT CGTCGTGCTG
CCGCCGGACA TCAACCAGTC GCATTACCGC TTCGAGCCGG TCGGCGAAGC CGACGGCAAG
CGCTCGCGCA CGATCCGCTA CGGCCTGGGC GCGGTGAAGG GCAGCGGCCA GAACGCGATC
GAGGAAATCC TGCGCGCGCG CGAGGAAAAG CCGTTCACCG ACCTGTTCGA CTTCTGCGAG
CGGATCGACC GGCGCGTCGT CAATCGCCGC ACGGTCGAGG CGCTGATCCG CGCCGGCGCA
TTCGATTCGC TGAACGCGAA CCGCGCGCAG ATGCTCGCGT CGGTGCCGCT CGCGATGGAA
GCGGCCGAGC AGGCCGCGGC GAACGCGATG CAGGCCGGCC TGTTCGACAT GGGCGCCGAG
TCGCCGCACG CGCATGCGCT CGTCGACGAG CCCGCGTGGG ACGACAAGCG CCGCCTGCAG
GAAGAGAAGG GCGCGCTCGG CTTCTACCTG TCCGGTCACC TGTTCGACGC GTATCGCGAC
GAAGTGCGCC GGTTCGTGAG GCAGAAGATC GGCGATCTGA AGGAGGGGCG CGACAAGCTC
GTCGCGGGCA TCATCGCGTC GCTGCGCACG CAGATGACCC AGCGCGGCAA GATGCTGATC
GCGTTGCTCG ACGACGGTTC GGGCCAGTGC GAGATCACGA TCTTCAACGA GCAGTTCGAG
GCGAACAAGG CGCTGTTCAA GGAAGACGAA CTGCTGATCG TGCAGGGGCA GGCGCGCAAC
GACGCGTTCA CCGGCGGTCT GCGCTTCACG GCCGATACGG TGATGGACCT CGAGCGTGCG
CGCAGCCGCT ACGCGCAGGC GGTGCGGCTC ACGATGAACG GTAATGCGGA TGCGGCGGCG
CTGCGCCGCG TGCTCGAACC GCACGTGTCG AAGGACGATT CGGCGGCCGC CCCCGCGTTC
GAGGCGCCTG TGCCGCGTGG CGGCGGGCGT GACGGCGGCC GTCGTCCGCA GGCACCGTTG
CCGAACGGGC TCGCGGTGCA GGTGCACTAC AGCAACGCGC GCGCGCAGGG CGAAATGCGT
CTTGGCGACG CGTGGCGCGT GAAGCCGAGC GACACGCTGC TCGCGGAGCT GCGCGCGACG
TTCGACGGCA GCGTCGTCGA AATCACGTAC TGA
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| Protein sequence | MGSLRDDAAT ITPMSDPRFV HLRVHSEFSI ADGIVRLDDI VKAAAADGQG ALALTDLGNA
FGLVRFYQEA RGKGIKPIAG CDVWITNPDD RDKPSRLLLL VKDKVGYLNL CELLSKAWLT
NQYRGRAELD ASWLDGELSQ GLLALSGAQQ GDIGLAFAAG NEEAARRHAE RWAKVFPGGF
YIELQRYGQP GAEAYIQQAA TLAASLGLPV VATHPTQFMT DDDFTAHEAR VCISEGDMLA
NPRRQKRFTT DQYFRTQDEM VALFADLPSA VANTVEIAKR CNLKLELGKP KLPLFPTPDG
MSLDDYLVQL SKEGLEKRLE QLFPDTAERD AQRDTYYKRL EFECGTITKM GFPGYFLIVA
DFINWAKNNG VPVGPGRGSG AGSLVAYALG ITDLDPLRYN LLFERFLNPE RVSMPDFDID
FCQHGRDRVI QYVKEKYGAD AVSQIATFGT MAAKAAVRDI GRVLDLGYMF TDGVAKLIPF
KPGKHVTIAD AMKEEPQLQE RYDHEDEVHQ LLDLAQRVEG LTRNVGMHAG GVLIAPGKLT
DFCPLYTQGD DGGVVSQYDK DDVEAVGLVK FDFLGLTTLT ILDWAERYIR RLDASKADWS
LAQVPLDDPA SFQILKKANT VAVFQLESRG MQGMLKDAQP DRFEDIIALV SLYRPGPMDL
IPSFCARKHG REKVEYPDPR VEPVLKETYG IMVYQEQVMQ MAQIIGGYSL GGADLLRRAM
GKKKPEEMVK HREIFAEGAA KNGLTREKSD EIFDLMEKFA GYGFNKSHAA AYALLAYYTA
WLKAHHPAEF MAANMTLAMD DTDKVKILFD DCVVNNLVVL PPDINQSHYR FEPVGEADGK
RSRTIRYGLG AVKGSGQNAI EEILRAREEK PFTDLFDFCE RIDRRVVNRR TVEALIRAGA
FDSLNANRAQ MLASVPLAME AAEQAAANAM QAGLFDMGAE SPHAHALVDE PAWDDKRRLQ
EEKGALGFYL SGHLFDAYRD EVRRFVRQKI GDLKEGRDKL VAGIIASLRT QMTQRGKMLI
ALLDDGSGQC EITIFNEQFE ANKALFKEDE LLIVQGQARN DAFTGGLRFT ADTVMDLERA
RSRYAQAVRL TMNGNADAAA LRRVLEPHVS KDDSAAAPAF EAPVPRGGGR DGGRRPQAPL
PNGLAVQVHY SNARAQGEMR LGDAWRVKPS DTLLAELRAT FDGSVVEITY
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