| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2192 |
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| Symbol | |
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| ID | 6177624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2442260 |
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| End bp | 2444197 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681965 |
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| Product | glycosyltransferase |
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| Protein accession | YP_001808887 |
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| Protein GI | 172061235 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.839356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCGG ACCCGCTTGA CCCGACCGAG ATCTTTTCCA TGCCCGGAAC CGCAGCACCC
GGCCGGCGAC GCACGTCCTC CGTGCCCGCT TCGGCCACGC ACGCCCGATC AGCCGCCGAT
CCCGCTCCCA ACGCGACACT CAATGCCGCC GGCACGCCCG CCGTGGCCGG CGCCACCGCG
ACGAACGGCG TCGGCGATCG CGTGCTGCGG CTCGGCTGGC GCGTGTGGCT GCTGGTCGCC
GCGCTGGTCT GCGCGTATAC GCTGCCGGGC GTGCTCGGGC ACGATCCGTG GAAGCAGGAC
GAAACCTATA CGTTCGGCAT CATCCAGCAC ATGCTCGAGA CGGGCGACTT CGTCGTGCCG
ACCAACGCCG GCCTGCCCTT CATGGAAAAG CCGCCGCTCT ACGCGTGGGT CGCGACGAGC
CTCGCGTGGC TGCTGCAGCG GGTGATGCCG CTGCACGACG CGGCACGGCT CGCGAGCGCG
CTGTTCGCCG CGCTTGCGTT CGGCTTCATC GCACGCGCGG CACGCAGTGC CAGTCGCGCC
GATGGCTGGC TCGACCTGCG CGTGATCGGC CCTGTCGTGC TGAGCGCGGG CACGCTCGTC
GTCATCAAGC ACGTGCACGA CATGATGACG GACGTCGCGC TGTTCGCCGG CACCGCGATG
GCCTTCTGCG GGCTGCTCGA GCTCGTGATG CAGCACGTCG CGCGCGCGCA GCAGATGCGG
CATGCGCTGC CGATGCAGCC GTCGGGCCGC TGGGCCGCGC CGATGTTCGG CGCGGGCGTC
GGCATCGCGC TGATGTCGAA GGGGCTGTTC GTGCCGCTCG TGTTCGCCGC CACGCTCATG
GGCGCGCTGG TGCTCTACCC GGCCTGCCGC ACGCGCGCGT TCGCGCGCTC GCTCGGTATC
GCCGCGCTCG TGTTCGCACC GTTCGCGCTG ATCTGGCCGA TCGCGCTGTT CCTGCGCTCC
GAGACGCTGT TCATGACCTG GTTCTGGGAC AACAACGTCG GCCGCTTCTT CGGCTTCTCC
GTGCCGGAAC TCGGCGCGGA AAACGACAAG CCGTTCTTCA TCCTGCGTGC GTTCCTGCTC
GTCGGCTTCC CGGTCGCGCC GCTCGCGATC GTCGCGCTGG CGCGCGGCGC ATGGCGTGAC
TGGCACGCGC CGCGCGTCGC GCTGCCCGTG CTGTTCGCCG GCATCGGCCT CGCGGTGCTG
CAAGTGTCCG CGACCTCGCG CCAGCTCTAC ATCCTGCCGT TCTTCGCGCC GCTTGCGCTG
ATCGCCGCGC AGGCGATCGA ACGCCTGCCG CGCGGGCTGC ATCTCGCGTG GGATTACCTT
AGCCGCCTGC TGTTCGGTAG CGCCGTCGCG CTCGCGTGGG TGATCTGGGC GGTGATGGCC
GATCCGCGCG CATCGCGGGC GAGCCTCGCG CCGCTCGGCC GCTGGCTGCC GCTCGACTGG
ACGATGCCGA TCGTGCCCGG GTTCGTGATC GGTGCGCTGG TGCTGACCGT CGGCTGGCTG
TCGCTGCTGC CGAAGCTGCG CACGACCGGC CCGTGGCGCG GTGCGCTGTC GTGGGGCGCG
GGCGCGCTGG TGGCGTGGGG CCTCGTGTAT ACGCTGCTGC TGCCGTGGCT CGACGTCGCG
AAGAGCTACC GGTCCGTATT CGACGACCTG GACGCGCATC TCGCGCTCGA ATGGCGCGAC
GACGACTGCA TGGCAAGCCT GCACGGGCTC GGCGAGTCGG AAGCGCCGAT GCTGTACTAC
TTCTCCGGGA TCCAGCACAC GCCGATCGAC GACGCGAAGA CGACGCGCTG CACGTGGATG
ATCGTCCAGG GCGTGCGGGC CGTCGATCCG GCGCCCGGCA GCGAATGGAA ACTGTTCTGG
AGCGGCGCGC GCCCGGGCGA CAACGCGGAA CTGCTGCGCG TCTACGTGCG CACGCCTGAA
GCACACGACG CGCCGTGA
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| Protein sequence | MSPDPLDPTE IFSMPGTAAP GRRRTSSVPA SATHARSAAD PAPNATLNAA GTPAVAGATA
TNGVGDRVLR LGWRVWLLVA ALVCAYTLPG VLGHDPWKQD ETYTFGIIQH MLETGDFVVP
TNAGLPFMEK PPLYAWVATS LAWLLQRVMP LHDAARLASA LFAALAFGFI ARAARSASRA
DGWLDLRVIG PVVLSAGTLV VIKHVHDMMT DVALFAGTAM AFCGLLELVM QHVARAQQMR
HALPMQPSGR WAAPMFGAGV GIALMSKGLF VPLVFAATLM GALVLYPACR TRAFARSLGI
AALVFAPFAL IWPIALFLRS ETLFMTWFWD NNVGRFFGFS VPELGAENDK PFFILRAFLL
VGFPVAPLAI VALARGAWRD WHAPRVALPV LFAGIGLAVL QVSATSRQLY ILPFFAPLAL
IAAQAIERLP RGLHLAWDYL SRLLFGSAVA LAWVIWAVMA DPRASRASLA PLGRWLPLDW
TMPIVPGFVI GALVLTVGWL SLLPKLRTTG PWRGALSWGA GALVAWGLVY TLLLPWLDVA
KSYRSVFDDL DAHLALEWRD DDCMASLHGL GESEAPMLYY FSGIQHTPID DAKTTRCTWM
IVQGVRAVDP APGSEWKLFW SGARPGDNAE LLRVYVRTPE AHDAP
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