| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2182 |
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| Symbol | |
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| ID | 6177535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2434679 |
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| End bp | 2435242 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641681955 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001808877 |
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| Protein GI | 172061225 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.365248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATCAG ACAAGGAACT CGCCGACTTT CTGGCGGGCG TCGAAAGGCG CGCGTTCAAG
CAGGCTGCCT ACGCCGTGCG TGACGACGAT GCGTCGCTCG ACATCGTGCA GGACGCGATG
ATCAAGCTGG CGGAGAAATA CGGGGACCGG CCGGCGGCCG AGCTGCCGCT GCTGTTCCAG
CGGATCCTGC AGAACGCCAT CCACGACTGG TTCCGCCGGC AGAAGGTCCG CAATACGTGG
GTCACGCTCT TCTCGTCGCT CAACAATACG GACGACGACG ACTTCGATCC GCTGGAAACG
CTCGAATCCG CGGACGACAA TGCGGGTGTC GAGAGCACAG AGCACCGCCT CGAGCGGGAA
CAGGTTCTGG CCCTGATCGA CGAAGAAATC CAGAAACTTC CGGCGCGTCA ACGGGAAGCG
TTCCTGATGC GTTATTGGGA AGATATGGAT GTCGCCGAGA CTGCCGCCGC AATGGGGTGC
TCCGAAGGCA GCGTCAAGAC GCACTGCTCG CGAGCCACTC ATACCCTGGC ACACGCGCTC
AAGGCCAAAG GAATCACGCT ATGA
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| Protein sequence | MASDKELADF LAGVERRAFK QAAYAVRDDD ASLDIVQDAM IKLAEKYGDR PAAELPLLFQ
RILQNAIHDW FRRQKVRNTW VTLFSSLNNT DDDDFDPLET LESADDNAGV ESTEHRLERE
QVLALIDEEI QKLPARQREA FLMRYWEDMD VAETAAAMGC SEGSVKTHCS RATHTLAHAL
KAKGITL
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