| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2178 |
|---|
| Symbol | |
|---|
| ID | 6177524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2430073 |
|---|
| End bp | 2430717 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641681951 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_001808873 |
|---|
| Protein GI | 172061221 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATC CTCATCCGAT CATCGCGCGC GAAGGCTGGC CGTTCATCGC GATTGCTGCC
GTCATCGCGC TGTTGATCCA CGCCGTCGGG GGCTTCGGCT TCGCGTGGCC GTTCTGGCTG
CTGCTCGTCT TCGTCGTCCA GTTCTTCCGC GATCCGCAGC GCCCGATTCC GGCGCAGCCG
AACGCGGTGC TGTGTCCGGC GGACGGCCGC ATCGTCGCGG TCGAGACCAC GCAGGATCCG
TACGCGAACC GCGAAGCGCT GAAGATCAGC GTGTTCATGA ATGTCTTCAA CGTCCATTCG
CAGCGTTCGC CGGTCGATGG CGCGGTCACC AAGGTCGAGT ATTTCCCGGG CGCGTTCCTG
AACGCGGCAA TCGACAAGGC GTCGACCGAG AACGAGCGCA ATGCGCTCGT GATCCAGACG
GCAAGCGGCA AGACCGTCAC CGCCGTGCAG ATCGCCGGCC TCGTCGCCCG CCGGATCCTC
TGCTACGTGC GCGCCGGCGA GCCGCTGTCG CGCGGCCAGC GCTACGGTTT CATCCGCTTC
GGTTCGCGCG TCGACGTGTA CCTGCCGCTC GGCAGCCGCG CGAAGGTCTC GATCGGCGAG
AAGGTCTACG CGTCGTCGAC GATCCTCGCC GAGCTCGAAC AGTAA
|
|---|
| Protein sequence | MNYPHPIIAR EGWPFIAIAA VIALLIHAVG GFGFAWPFWL LLVFVVQFFR DPQRPIPAQP
NAVLCPADGR IVAVETTQDP YANREALKIS VFMNVFNVHS QRSPVDGAVT KVEYFPGAFL
NAAIDKASTE NERNALVIQT ASGKTVTAVQ IAGLVARRIL CYVRAGEPLS RGQRYGFIRF
GSRVDVYLPL GSRAKVSIGE KVYASSTILA ELEQ
|
|---|
| |