| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2176 |
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| Symbol | |
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| ID | 6177527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2427324 |
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| End bp | 2428868 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641681949 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001808871 |
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| Protein GI | 172061219 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA AGCTGATCAT TTTCGATACG ACGTTGCGTG ACGGTGAACA ATCGCCCGGC
GCGTCGATGA CGAAGGAAGA GAAAATCCGC ATCGCGAAGC ATCTCGAGCG GATGAAGGTC
GACGTGATCG AAGCCGGCTT CGCGGCCAGC TCGAACGGCG ACTTCGATGC GATCCACACG
ATCGCCGGTC TCGTGAAGGA CAGCACGATC TGCTCGCTGG CGCGCGCCAA CGACAAGGAC
ATCCAGCGCG CGGCCGACGC GTTGAAGCCG GCCAATAGCG CGCGGATCCA CACGTTCATC
GCGACGTCGC CGCTGCACAT GGAGAAGAAG CTGCGGATGA CGCCGGACCA GGTGTTCGAG
CAGGCGCGCC TCGCCGTGCG CTTCGCGCGC AAGTTCACCG ACAACGTCGA ATTCTCGCCG
GAAGACGGCA GCCGCTCGGA TCTCGACTTC CTGTGCCGCG TGCTGGAAGC CGTGATCGCC
GAAGGGGCGA CGACGATCAA CATCGCCGAC ACGGTCGGCT ACGGCGTGCC GGAACTCTAC
GGCAACCTCG TGAAGACGCT GCGCGAACGC ATTCCGAACT CGGACAAGGC GATCTTCTCC
GTGCATTGCC ACAACGACCT CGGCATGGCG GTGGCGAACT CGCTCGCCGG CGTGAAGATC
GGCGGTGCGC GGCAGGTGGA GTGCACGATC AACGGTCTCG GCGAGCGCGC GGGCAACACG
TCGCTCGAGG AAATCGTGAT GGCCGTGAAG ACCCGCAAGG ACTATTTCGG CCTCGACGTC
GGCCTCGACA CCACGCAGAT CGTCCCGACG TCGAAGCTCG TGTCGCAGAT CACCGGTTTC
GTCGTGCAGC CGAACAAGGC CGTGGTCGGC GCGAACGCAT TCGCGCACGC GTCGGGCATC
CATCAGGATG GCGTGCTGAA GGCGCGCGAC ACGTACGAGA TCATGCGCGC GGAAGACGTG
GGCTGGACCG CGAACAAGAT CGTGCTCGGC AAGCTGTCGG GCCGCAATGC GTTCAAGCAG
CGCCTGCAGG AGCTCGGCGT GTCGCTCGAC AGCGAAACCG AACTGAACGC CGCGTTCATG
CGCTTCAAGG ATCTGGCCGA CCGCAAGTCC GAGATTTTCG ACGAAGACAT CATTGCGATC
GTCTCCGAGG AGTCGGCGCT CGCGCAGGAG CAGGAGCACT ACAAGTTCGT GTCGCTGTCG
CAGCGCTCGG AAACCGGCGA GCAGCCGCAG GCCAAGGTCG TGTTCGCACT CGATGGCAAG
GAAGTGACCG GCGAGGCACG TGGCAACGGC CCGGTCGACG CGACGTTCAA CGCGATCGAG
GGCGAAGTCG GCAGCGGGTC GGAACTGCTG CTGTACTCGG TGAACGCGAT CACGACCGGT
ACGCAGGCGC AGGGCGAAGT GACGGTGCGG CTGTCGAAGA GCGGGCGGAT CGTCAACGGC
GTCGGCACCG ACCCCGATAT CGTCGCGGCT TCCGCGAAGG CGTACATCGC CGCGCTGAAC
AAGCTGCACT CGAAGGACGA CAAGCTCAAC CCGCAGCGCT CGTAA
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| Protein sequence | MTDKLIIFDT TLRDGEQSPG ASMTKEEKIR IAKHLERMKV DVIEAGFAAS SNGDFDAIHT
IAGLVKDSTI CSLARANDKD IQRAADALKP ANSARIHTFI ATSPLHMEKK LRMTPDQVFE
QARLAVRFAR KFTDNVEFSP EDGSRSDLDF LCRVLEAVIA EGATTINIAD TVGYGVPELY
GNLVKTLRER IPNSDKAIFS VHCHNDLGMA VANSLAGVKI GGARQVECTI NGLGERAGNT
SLEEIVMAVK TRKDYFGLDV GLDTTQIVPT SKLVSQITGF VVQPNKAVVG ANAFAHASGI
HQDGVLKARD TYEIMRAEDV GWTANKIVLG KLSGRNAFKQ RLQELGVSLD SETELNAAFM
RFKDLADRKS EIFDEDIIAI VSEESALAQE QEHYKFVSLS QRSETGEQPQ AKVVFALDGK
EVTGEARGNG PVDATFNAIE GEVGSGSELL LYSVNAITTG TQAQGEVTVR LSKSGRIVNG
VGTDPDIVAA SAKAYIAALN KLHSKDDKLN PQRS
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