| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2172 |
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| Symbol | |
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| ID | 6177794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2422665 |
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| End bp | 2423924 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681945 |
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| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001808867 |
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| Protein GI | 172061215 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.916243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGT GGAAACGGTG CGCGCTCGCA TTGAGCGCGG GGTGGATGCT GGCGTCGTCC
GCGTTCGCGG CAGGCGAGCC GGTGCGGATC GCGCTGATCG AAGGAATGTC GGGCCCGTTC
GCGAACGCGG GCGCGGCGGT CGAGCGCAAC CTGCGCTTCG GCGTCGAGCA GGTCAACGCG
GCAGGCGGCG TGAAGCTGCG CGATGGCGCG TATCCGCTCG AGCTCGTCGT GCTCGACAGC
AAGGGCAGTC CGGAAGAGGC GCTCGTGCAG TTGCGCGCGG CGGCGGACCG GCACATCGGC
TTCGTCGCGC AGGGCAACAG CTCGGCGGTC GCGGCCGCGC TCGTCGCGGC GCTCGACAAG
CTGAACGCGC GCAATCCGGA CAGCCGGATG CTGTTCGTCA ACTATTCGGC CGACGATCCG
GCGCTGACCG GCGCGCGCTG CAGCTTCTGG CATTTCCGTT TCGATGCGCA CGCGGGGATG
CGCATGGCTG CGCTGGCGGA CGTGATGGCG CGCGACCGCG CGCTGCGCAA GGTCTACCTG
CTGAACCAGG ACTACAGCTT CGGCCACGAC GTCAGCACGC TCGCGCGGCA GGCGCTGGCC
GAACGGCGCC CGGATGTGAC GATCGCCGGC GACGAATTCC ACCCGATCGG CCGCATCAAG
GATTTCTCGC CGTACATCGC GAAGATCCGC GCGAGCGGCG CGGACGCCGT CGTGACCGGG
AACTGGGGCA ACGATCTCAC GCTGCTCGTG AAGGCGGCGC GCGAGCAGGG GCTGAACGCG
AAGTTCTATA CGTTCTACGG CAACAGCCTC GGCGCGCCGG CCGCGCTCGG CGACGCCGGC
GTCGGCCGGG TGATCGCCGT CGCGGACTGG CATCCGAACG CCGGCGGCGC GAAGTCGGAC
GCGTTCTACC GCGCGTTCCG GGCCCGTTTC CCCGCGGCGC AGGACGACTA TCCGGTGCGG
CGCATGAGCC TGATGATCGA AATGCTCGCG GCGGCGATGA ATCGGGCCGG CTCGGCCGAC
CCGGTCGCGG TGGCGCGCGC GCTGGAAGGG CTGTCGTTCG ACGACGGCTT CCATGCGTCG
ACGATGCGCA CGCAGGATCA CCAGTTGATC CAGCCCCTTT ACGTGATGGA AATGGACAAG
GCCGGCACGC CGGGCGTGCG CTTCGACAAC GAGGGCTCGG GCTACGGCTT CCGGACAGTC
CTCGCGGTGC CCGCCCAGCG TACGCCGATA CCGTCGACCT GCTCGATGAC GCGCCCGTGA
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| Protein sequence | MQQWKRCALA LSAGWMLASS AFAAGEPVRI ALIEGMSGPF ANAGAAVERN LRFGVEQVNA
AGGVKLRDGA YPLELVVLDS KGSPEEALVQ LRAAADRHIG FVAQGNSSAV AAALVAALDK
LNARNPDSRM LFVNYSADDP ALTGARCSFW HFRFDAHAGM RMAALADVMA RDRALRKVYL
LNQDYSFGHD VSTLARQALA ERRPDVTIAG DEFHPIGRIK DFSPYIAKIR ASGADAVVTG
NWGNDLTLLV KAAREQGLNA KFYTFYGNSL GAPAALGDAG VGRVIAVADW HPNAGGAKSD
AFYRAFRARF PAAQDDYPVR RMSLMIEMLA AAMNRAGSAD PVAVARALEG LSFDDGFHAS
TMRTQDHQLI QPLYVMEMDK AGTPGVRFDN EGSGYGFRTV LAVPAQRTPI PSTCSMTRP
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