Gene BamMC406_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2157 
Symbol 
ID6176287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2407488 
End bp2408138 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID641681929 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001808852 
Protein GI172061200 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.704068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCA CGACCGTACT GTTCTACATC TTCGCGCTGC TCCTGGTGGT ATCAGGGCTG 
AAGGTGATCA CTTCGCGCAA CCCGGTGGCG TCTGCGCTTT TCCTTGTGCT GGCGTTCTTC
AACGCCGCCG CGATCTGGAT GCTGCTGGAA GCGGAGTTCC TCGCGATCCT GCTGGTGCTG
GTGTACGTGG GCGCCGTGAT GGTGCTGTTC CTGTTCGTCG TGATGATGCT GGACATCAAC
ATCGATTACC TGCGCCGCGA CTTCAAGCGC TTCGTGCCGA TGGCAACGGT GGTCGGCGCG
ATCATCGTGG TCGAGACCGC GCTGATCCTG TGGCGCGGCT ACGGCGACAC GCACGCGGTG
CACGCCATGG CGACGGGCGC GATGGCCGAC TGGTCCAACA CGCGACTGAT CGGCAAGGTG
ATCTACACCG ACTACATCTT CGCGTTTGAA ATCGCCGGCC TGGTGTTGCT GGTCGCGATC
ATCGCCGCGA TCGGGCTGAC CGAGCGCAAG GGCAAGGACA GCAAGCGCCA GCGCGTGTCG
GATCAGGTCA AGGTGCGCCG CAACGACCGC GTGCGCCTCG TGAAGATGGA AGCGGAAAAG
CCGCAGCCGG AAACGGCGCA GAGCGAAGCC GGTACGAGCA CCAACGGCTA A
 
Protein sequence
MEFTTVLFYI FALLLVVSGL KVITSRNPVA SALFLVLAFF NAAAIWMLLE AEFLAILLVL 
VYVGAVMVLF LFVVMMLDIN IDYLRRDFKR FVPMATVVGA IIVVETALIL WRGYGDTHAV
HAMATGAMAD WSNTRLIGKV IYTDYIFAFE IAGLVLLVAI IAAIGLTERK GKDSKRQRVS
DQVKVRRNDR VRLVKMEAEK PQPETAQSEA GTSTNG