Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2154 |
Symbol | |
ID | 6176218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2403584 |
End bp | 2405074 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641681926 |
Product | NADH dehydrogenase subunit M |
Protein accession | YP_001808849 |
Protein GI | 172061197 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.575239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.457666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTT TTCCGATTCT CAGTACCGCG ATCTGGCTGC CGATCGTTTT CGGCCTCCTC GTGCTCGCGG TGGGTAACGA TAAAAATCCG GGGACGGCCC GCTGGGTCGC GCTGATCGGT TCGCTGCTCG GTCTCGCGGT CACGATCCCG CTGATCACGG ACTTCGACTC GAGCACGGCC GCGCTGCAGT TCGTCGAGAA GTCGACCTGG ATCGAACGCT TCGACATCTC GTACCACCTC GGCGTCGACG GCATTTCGAT GTGGTTCGTC GTGCTGACCG CGCTGATCAC GGTGATCGTC GTGATCGCCG CGTGGGAAGT GATCACGGAG AACGTCGCGC AGTACCTCGC GGCCTTCCTG ATCCTGTCCG GGATCATGAT CGGCGTGTTC TCGGCGGCCG ACGGCCTGCT GTTCTACGTG TTCTTCGAGG CGACCCTGAT CCCGATGTAC ATCATCATCG GCGTGTGGGG CGGCCCGAAC CGCGTGTATG CGGCGTTCAA GTTCTTCCTG TACACGCTGG CCGGCTCGCT GCTGATGCTG GTCGCGCTGA TCTACCTGTA CACGCAGACG CATTCGTTCG ACCTCGCGAC GTGGCAGAAC GCCAAGATCG CGATGACGCC GCAGATCCTG CTGTTCATCG CATTCTTCCT CGCGTTCGCG GTGAAGGTGC CGATGTGGCC GGTGCATACC TGGCTGCCGG ACGCACACGT GGAAGCGCCG ACGGGCGGCT CGGTCGTGCT GGCGGCAATC ATGCTGAAGC TCGGCGCGTA CGGTTTCCTG CGTTTCTCGC TGCCGATCAC GCCTGACGCA AGCCACTTCC TCGCACCGGT CGTGATCACG CTGTCGCTGA TCGCGGTGAT CTACATCGGC CTCGTCGCGA TGGTGCAGGC CGACATGAAG AAGCTGGTCG CGTATTCGTC GATCGCGCAC ATGGGCTTCG TGACGCTCGG CTTCTTCATC TTCAACCAGC TCGGCGTCGA AGGCGCGATC ATCCAGATGA TCTCGCACGG CTTCGTGTCG GGTGCGATGT TCCTGTGCAT CGGCGTGCTG TACGACCGTT TGCACTCGCG CCAGATCGCC GACTACGGCG GCGTCGTGAA CGTGATGCCG AAGTTCGCGG CATTCGCGAT GCTGTTCTCG ATGGCCAACT GCGGCCTGCC GGGCACGTCG GGTTTCGTCG GCGAGTTCAT GGTGATTCTC GCCGCCGTCC AGTACAACTT CTGGATCGCA TTCGGCGCGG CATTCACGCT GATCCTCGGC GCCGCCTACA CGCTGTGGAT GTACAAGCGC GTGTACTTCG GCGCGGTCGC GAACGATCAC GTTGCCAAGC TGAAGGACAT CGGCCGTCGC GAATTCGTGA TGCTGGCCGT GCTGGCCGCG TTCACGATGC TGATGGGCCT GTATCCGAAG CCTTTCACCG ACGTGATGCA CGTTTCCGTG GAAAACCTCC TCTCCCATGT CGGGCAGTCC AAACTGCCGC TGGCCCAGTA A
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Protein sequence | MHAFPILSTA IWLPIVFGLL VLAVGNDKNP GTARWVALIG SLLGLAVTIP LITDFDSSTA ALQFVEKSTW IERFDISYHL GVDGISMWFV VLTALITVIV VIAAWEVITE NVAQYLAAFL ILSGIMIGVF SAADGLLFYV FFEATLIPMY IIIGVWGGPN RVYAAFKFFL YTLAGSLLML VALIYLYTQT HSFDLATWQN AKIAMTPQIL LFIAFFLAFA VKVPMWPVHT WLPDAHVEAP TGGSVVLAAI MLKLGAYGFL RFSLPITPDA SHFLAPVVIT LSLIAVIYIG LVAMVQADMK KLVAYSSIAH MGFVTLGFFI FNQLGVEGAI IQMISHGFVS GAMFLCIGVL YDRLHSRQIA DYGGVVNVMP KFAAFAMLFS MANCGLPGTS GFVGEFMVIL AAVQYNFWIA FGAAFTLILG AAYTLWMYKR VYFGAVANDH VAKLKDIGRR EFVMLAVLAA FTMLMGLYPK PFTDVMHVSV ENLLSHVGQS KLPLAQ
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