| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2120 |
|---|
| Symbol | |
|---|
| ID | 6178841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2367266 |
|---|
| End bp | 2368138 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641681887 |
|---|
| Product | pirin domain-containing protein |
|---|
| Protein accession | YP_001808815 |
|---|
| Protein GI | 172061163 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG CTCGCTCGCT TGACCGCACC TACCCCGCGC TTCGCACGAC CGAAGGCGGC
GGCTTCGTGG TTCACCGCCC GTTCCCGACC CGGCTGCTGA TGGATTTCGA TCCGTTCCTG
CTGCTCGATG AAATGGGCCC CATCGACTAT GCGCCCGGCG AGGCCAAGGG CGCGCCCGAT
CACCCGCATC GCGGCTTCGA GACCGTCACC TACGTGCTCG ACGGGCGCTT TCGCCATCGC
GACTCGGCCG GCCATGCCGG CACGCTCGGG CCCGGCGACG TGCAGTGGAT GACGGCCGGT
GCGGGCGTCG TGCACAGCGA AATGCCGGAT CCGGAATTCG CACAGGCGGG CGGCCGCTCG
CACGGTTTCC AGTTGTGGGT CAACCTGCCG CGCCGCGACA AGCTGATCGC ACCGCGCTAC
CAGGAAATCC CGGCCGACCG CATCCCGATC GCGACGTCGC CGGACGGCCG TGCGCAGGTC
CGCGTGATCG CCGGCGAAGC GTTCGGTGTG CGTGCGGCGA TCGAGACGCG CACGCCGATC
CTCTACCAGC ATTTCACGCT GCAACCGGGC GCAATGGTCA CGCAGCCGGT GCCGCCAGGT
TATCGCGTAT TCGCCTATCC GCTCGACGGA GCGGGCCGCT ACGGGCCCGA CAGGCAACCC
GTCGACGCAC GGCACATGGT CGTCTACGGT GACGATGGCG ACGCGGTAAC CTTCGAAGCC
GGCGATACGC CGCTCGACCT GCTGCTGATC GGCGGCGTCC CGCTCAACGA GCCGATCGTC
CGCTATGGCC CGTTCGTGAT GAATACCGAG GAAGAGATCC GACAGGCCGT CGTCGACTAC
CAGACGGGCC GCATGGGCCG CATCGAAGCG TGA
|
|---|
| Protein sequence | MTTARSLDRT YPALRTTEGG GFVVHRPFPT RLLMDFDPFL LLDEMGPIDY APGEAKGAPD
HPHRGFETVT YVLDGRFRHR DSAGHAGTLG PGDVQWMTAG AGVVHSEMPD PEFAQAGGRS
HGFQLWVNLP RRDKLIAPRY QEIPADRIPI ATSPDGRAQV RVIAGEAFGV RAAIETRTPI
LYQHFTLQPG AMVTQPVPPG YRVFAYPLDG AGRYGPDRQP VDARHMVVYG DDGDAVTFEA
GDTPLDLLLI GGVPLNEPIV RYGPFVMNTE EEIRQAVVDY QTGRMGRIEA
|
|---|
| |