| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2112 |
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| Symbol | |
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| ID | 6178914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2360122 |
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| End bp | 2361645 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641681879 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001808807 |
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| Protein GI | 172061155 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0775918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA TCAAACAGGA AGACCTGATC CAGAGCATCG CGGATTCGCT GCAGTACATC
AGCTACTACC ACCCGCTCGA CTACATCCAG GCCCTCGGCC GCGCGTACGA GCTGGAAGAG
AGCCCGGCCG CGAAGGACGC GATCGCGCAG ATCCTCACGA ACAGCCGCAT GTGCGCGGAA
GGCAAGCGCC CGATCTGCCA GGACACCGGC ATCGTCACGA TCTTCGTGAA GGTCGGCATG
GACGTGCGCT GGGACGGCGC GACGATGGGC CTCACCGACA TGATCAACGA AGGCGTGCGC
CGCGGTTACA CGCACCCGGA CAACGTGCTG CGCGCATCGA TCGTCAACCC GCCGGAAGGC
GCTCGCAAGA ACACGAACGA CAACACGCCG GCCGTGATCC ACTACGAGAT CGTGCCGGGC
GACAAGGTCG ACGTGCAGGT CGCGGCGAAG GGTGGCGGCT CGGAGAACAA GTCGAAGTTC
GTGATGCTGA ATCCGTCGGA TTCGATCGTC GACTGGGTGC TGAAGACGGT CCCGACGATG
GGCGCCGGCT GGTGCCCGCC GGGCATGCTC GGAATCGGCA TCGGCGGCAC CGCTGAAAAG
GCGATGCTGA TGGCGAAGGA ATCGCTGATG GAGCCGATCG ACATTCAGGA AATCATCGCG
CGCGGTCCGA AGGACTGGGT CGAGGAACTG CGCGTCGAGC TGCATGAGAA GGTCAACGCG
CTCGGCATCG GCGCGCAGGG CCTCGGCGGC CTCGCGACCG TGCTCGACGT GAAGATCATG
GCCGCTCCGA CGCACGCGGC GTCGAAGCCG GTCGCGCTGA TCCCGAACTG CGCGGCCACG
CGCCACGCGC ACTTCGTGCT CGACGGCTCC GGCCCGGCCA AGCTGGAAGC GCCGTCGCTC
GACGCGTGGC CGAAGGTCCA GTGGGAACCG AACACCGAAA CCAGCAAGCG CGTCGACCTG
AACACGCTGA CGCCGGAAGA AGTCGCGAGC TGGGCGCCGG GCCAGACGCT GCTGCTGTCG
GGCAAGATGC TCACGGGCCG CGACGCCGCG CACAAGCGCA TCGCCGACAT GCTCGCGAAG
GGCGAGAAGC TGCCGGTCGA CTTCACGAAC CGCGTGATCT ACTACGTGGG CCCGGTCGAT
CCGGTGCGTG ACGAAGTGGT CGGCCCGGCA GGCCCGACGA CGGCCACGCG GATGGACAAG
TTCACCGAGA CGATGCTCGC TCAGACGGGT CTGATCTCCA TGGTCGGCAA GGCCGAACGC
GGCCCGGTCG CGATCGATGC GATCAAGAAG CACAAGGCGG CCTACCTGAT GGCGGTCGGC
GGTGCGGCGT ACCTCGTGTC GAAGGCGATC CGCGGCGCGA AGGTGCTCGC CTTCGAAGAC
CTCGGCATGG AAGCGATCTA CGAGTTCGAC GTGCAGGACA TGCCGGTGAC GGTGGCCGTC
GATTCGTCGG GCACGTCGGT GCACCAGACC GGTCCGAAGG AATGGCAGGC GAAGATCGGC
AAGATCCCGG TCGCAACCGC TTAA
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| Protein sequence | MTVIKQEDLI QSIADSLQYI SYYHPLDYIQ ALGRAYELEE SPAAKDAIAQ ILTNSRMCAE
GKRPICQDTG IVTIFVKVGM DVRWDGATMG LTDMINEGVR RGYTHPDNVL RASIVNPPEG
ARKNTNDNTP AVIHYEIVPG DKVDVQVAAK GGGSENKSKF VMLNPSDSIV DWVLKTVPTM
GAGWCPPGML GIGIGGTAEK AMLMAKESLM EPIDIQEIIA RGPKDWVEEL RVELHEKVNA
LGIGAQGLGG LATVLDVKIM AAPTHAASKP VALIPNCAAT RHAHFVLDGS GPAKLEAPSL
DAWPKVQWEP NTETSKRVDL NTLTPEEVAS WAPGQTLLLS GKMLTGRDAA HKRIADMLAK
GEKLPVDFTN RVIYYVGPVD PVRDEVVGPA GPTTATRMDK FTETMLAQTG LISMVGKAER
GPVAIDAIKK HKAAYLMAVG GAAYLVSKAI RGAKVLAFED LGMEAIYEFD VQDMPVTVAV
DSSGTSVHQT GPKEWQAKIG KIPVATA
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