Gene BamMC406_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2110 
Symbol 
ID6179013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2358459 
End bp2359367 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID641681877 
Producthypothetical protein 
Protein accessionYP_001808805 
Protein GI172061153 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.244484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCGCT ACGCCCTCTT CCTCATTCTG TCGATGCTGT TTGTCGGCAG CAACGTCGGT 
ATCGGTAAAT CCATCGTCGT CTTCGTCCCG GTCGCCATCC TCGCCACGCT GCGCTTCGTG
ATCGCGATCG CCGTACTGTG GCCGCTGTTC AGCCCGGTGA AGATGCGCGC GGTCCGGCGC
GCGGAATGGT TGAACCTGTT CCTGCAGGCG TTCTTCGGCA CCTTCATGTT CACGCTGCTG
ATGCTCAACG GCGTGCAACG CACGAGCGCG GTCGCGGCCG GCGTGATCAC CAGCACGATC
CCCGCCATCG TCGCGCTGTT CGCGTGGCTG ATCCTGCGTG AAAAACCGAA CGGCCGTGCG
CTCGTGTCGA TCGCGCTCGC GATCGCCGGC GTCGTGACGA TCAATCTCGC GAACGGCGGT
ACGTCCGCGC ACGAGGCCGG CGCCGCCTCG TCCGGCTCGC TGACCGGCAA CCTGCTGATC
CTCGGCGCCG TCTGCTGCGA ATCGATCTAC GTGATCCTGT CGCGCCGGCT CACGCAGACG
CTCGCCCCCA TCGACATCTG CGCGTACACG CACCTGTTCG GCCTGTTCCT GATGCTGCCG
CTCGGCGCGA CGGCGATGTG GCAGTTCGAT TACGCGAGCG TGCCGGCCGC TACGTGGGCG
CTCGTCGTCT GGTACGGGCT GTCGGCCAGC ATCTTCTCGT TCTGGCTGTG GATGAAGGGC
ATCCGGCACG TGCCGGGCAG CCTCGCCGGC GTGTTCAGCG CGGTGCTGCC GGTCGCGGCC
GCCGCGTACG GCATCGCGTT CCTCGGCGAA CGCCCGACGC TCGCGCACGG CATCGCGCTC
GCGTGCGTCG TCACCGGCAT CGTGCTCGCG AGCCTGCGCG TGAAACGCGC GCCGGCCGCG
GCTTCCTGA
 
Protein sequence
MNRYALFLIL SMLFVGSNVG IGKSIVVFVP VAILATLRFV IAIAVLWPLF SPVKMRAVRR 
AEWLNLFLQA FFGTFMFTLL MLNGVQRTSA VAAGVITSTI PAIVALFAWL ILREKPNGRA
LVSIALAIAG VVTINLANGG TSAHEAGAAS SGSLTGNLLI LGAVCCESIY VILSRRLTQT
LAPIDICAYT HLFGLFLMLP LGATAMWQFD YASVPAATWA LVVWYGLSAS IFSFWLWMKG
IRHVPGSLAG VFSAVLPVAA AAYGIAFLGE RPTLAHGIAL ACVVTGIVLA SLRVKRAPAA
AS